| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_1901 |
|---|
| Symbol | rpsR |
|---|
| ID | 4082607 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingopyxis alaskensis RB2256 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008048 |
|---|
| Strand | + |
|---|
| Start bp | 2000803 |
|---|
| End bp | 2001027 |
|---|
| Gene Length | 225 bp |
|---|
| Protein Length | 74 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 638010277 |
|---|
| Product | 30S ribosomal protein S18 |
|---|
| Protein accession | YP_616946 |
|---|
| Protein GI | 103487385 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0238] Ribosomal protein S18 |
|---|
| TIGRFAM ID | [TIGR00165] ribosomal protein S18 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.162774 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCACGAC CCTTTTTCCG CCGCCGCAAG ACCTGCCCCT TCAGCGCGAA GGACGCACCG
GTCATCGATT ACAAGGACGT CCGCCTGCTC CAGGGTTACC TGTCCGAGCG CGGCAAGATC
GTCCCGTCGC GGATCACCGC GGTGTCCACC AAGAAGCAGC GCGAGCTGGC CAAGGCGATC
AAGCGCGCCC GCCACATCGG TCTGCTCCCC TACATTGTGA AGTAA
|
|---|
| Protein sequence | MARPFFRRRK TCPFSAKDAP VIDYKDVRLL QGYLSERGKI VPSRITAVST KKQRELAKAI
KRARHIGLLP YIVK
|
|---|
| |