Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sala_1898 |
Symbol | |
ID | 4082604 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingopyxis alaskensis RB2256 |
Kingdom | Bacteria |
Replicon accession | NC_008048 |
Strand | - |
Start bp | 1997835 |
End bp | 1998662 |
Gene Length | 828 bp |
Protein Length | 275 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 638010274 |
Product | peptidase U61, LD-carboxypeptidase A |
Protein accession | YP_616943 |
Protein GI | 103487382 |
COG category | [V] Defense mechanisms |
COG ID | [COG1619] Uncharacterized proteins, homologs of microcin C7 resistance protein MccF |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.186382 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTATTG GCATCGTTGC CCCCTCGACC CCGATCCTGC CCGACGATGC CGAGGCGGTG CGCGCGCTGG CCAGTCTCGG CTACCCCGGC GTCGAACTGA TCTTCGACCC GCAATGTTTC GCAATGCATG GCCATTTCGC GGGTGAGGAC GGGCACCGTT TTGCCGCGCT CGTCGAAATG GCGAACCGTC CCGACATCGA TGCGCTGTGG TTCGCGCGCG GCGGCTATGG TGCGTGCCGG ATCGCCGAGG AGGCGGTCGC GGCGATGGCC GATGTAGCCC GCGCCAAAGC CTTCCTCGGC TATTCGGATC AGGGCAATCT GCTGGCGGCG CTCTATCGCG ACGGCTTTGA CCATGTCGCG CACGGACCGA TGGTCGCCGA TATCCGGCGC GAAGGCGGCG AGGCGGCGGT GACGCGCGCG CTCGACTGGC TGGTCGCGCG CGATCCCGCG GCGTGCGAGC CGGGGCTGGA GCATGGCGCG CGCCATGCGG CGTTCAACCT GATGACGCTG TCGATGCTGC TCGGCACCCC GCTCGAACCC GATCTGGCTG GGCATGTGCT GCTGATCGAG GAGGTCAGCG AATATCTATA CGCCTTTGAC CGGGCGCTGT TTCATGTGAC GAGCTATCTG GCGCCGCGCG GGCTTGCCGG ACTCCGGCTG GGGCGGGTTA GCGACATTCC GGAAAACGAC CGGCCTTTTG GACTGGACGC GGAAGAAATT GCGCAGGGCT GGTGCTCGCG CACCGGCATC CCCTGGCTCG GTCGCGCCGA CATCGGCCAT GATGCGGCGA ACAAGGTCGT GCCCTTCGGC TTGCATCGGG CGGGGTGA
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Protein sequence | MRIGIVAPST PILPDDAEAV RALASLGYPG VELIFDPQCF AMHGHFAGED GHRFAALVEM ANRPDIDALW FARGGYGACR IAEEAVAAMA DVARAKAFLG YSDQGNLLAA LYRDGFDHVA HGPMVADIRR EGGEAAVTRA LDWLVARDPA ACEPGLEHGA RHAAFNLMTL SMLLGTPLEP DLAGHVLLIE EVSEYLYAFD RALFHVTSYL APRGLAGLRL GRVSDIPEND RPFGLDAEEI AQGWCSRTGI PWLGRADIGH DAANKVVPFG LHRAG
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