| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_1831 |
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| Symbol | |
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| ID | 4082183 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | + |
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| Start bp | 1925390 |
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| End bp | 1926598 |
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| Gene Length | 1209 bp |
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| Protein Length | 402 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 638010206 |
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| Product | HI0933-like protein |
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| Protein accession | YP_616876 |
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| Protein GI | 103487315 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2081] Predicted flavoproteins |
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| TIGRFAM ID | [TIGR00275] flavoprotein, HI0933 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.000611752 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.363311 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGCTGGC GATCGCAAAG CTGCACTGAC GCCTGCGTGG CAGTATTCGA TTATGACGCC
ATCGTGCTGG GTGCCGGCGC GGCCGGGCTG ATGTGCGCCG CGGTCGCGGG GCAGCGGGGG
CGGCGCGTCC TGCTGCTCGA TCACGCCGAC GAGGTGGGCA AGAAAATCCT GATTTCGGGC
GGCGGTCGCT GCAATTTCAC CAACATCTAC ACGCGCCCCG AAACCTATAT TTCGGCGAAC
CCGCATTTCG CGAAGTCGGC GCTCGCGCGC TACGCCCCCG CCGACTTCAT CGCGCTCGTC
GAGCGCCATG GCATCGCATA TCATGAAAAG ACGCTCGGCC AGTTGTTCTG CGATGGATCG
GCGAAGCAGG TCGTGGCGAT GCTGCTCGAC GAATGCGCAA GGGGCGGCGT CGACGTCCGC
TGCGGGCAGC CGGTGCGTCA GGTTACCCAC GCCGACGGTC GGTTCGCTGT CCGCTTCGGC
GACCTGGACT TCGCCGCCCC CAATCTTGTC ATTGCGACAG GCGGGCCTTC GATCCCGAAG
ATGGGCGCGT CCGGTTTCGC TTATGATCTC GCCCGCCAAT TCGGCCTCAA GGTCGTCGAG
CCGCGCCCTG CGCTCGTCCC GCTGACGCTT GGCGGCGACG ATGTGCTGTT CCGCGAGTTG
TCGGGCGTTG CGACGCCGGT CGAGGCGCGC GCGGGCAAGG CGGCGTTTCG CGAAGCCGCG
CTCTTCACGC ACAAGGGGCT TTCCGGTCCG GCAATCCTTC AGGTCAGCAG CTATTGGCGC
CACGGCGAAC CGGTGACGAT CGACTTTTTG CCCGATGCCG CGCCGGGCTG GCTGCTCGGA
GCGAAGCGCG CGCGCCCGCG CGCGACGCTC GCTTCGGCGC TCGCGCTCCC CGACCGCCTT
GCGCAGACGC TCGCCGACCG CCTTGCGCTC CCCGGCGAAC TCGGCGCCCA GACCGACCGC
AAGCTCGCCG ACGCCGAAGC GCGCCTCAAA CGCTGGACTT TCCGCCCCAA CGGCACCGAA
GGCTTCGCAA AGGCCGAGGT CACCGCCGGC GGCATTTCGA CCGCAAACCT GTCCTCGCAA
ACAATGATGG CCAAATGCGT GCCGGGACTG TATGCGGTCG GCGAAGCCGT GGACGTCACC
GGGTGGCTGG GCGGCTATAA TTTTCAATGG GCCTGGGCCA GCGGACACGC GGCGGGCCAG
GCCCTTTAG
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| Protein sequence | MGWRSQSCTD ACVAVFDYDA IVLGAGAAGL MCAAVAGQRG RRVLLLDHAD EVGKKILISG
GGRCNFTNIY TRPETYISAN PHFAKSALAR YAPADFIALV ERHGIAYHEK TLGQLFCDGS
AKQVVAMLLD ECARGGVDVR CGQPVRQVTH ADGRFAVRFG DLDFAAPNLV IATGGPSIPK
MGASGFAYDL ARQFGLKVVE PRPALVPLTL GGDDVLFREL SGVATPVEAR AGKAAFREAA
LFTHKGLSGP AILQVSSYWR HGEPVTIDFL PDAAPGWLLG AKRARPRATL ASALALPDRL
AQTLADRLAL PGELGAQTDR KLADAEARLK RWTFRPNGTE GFAKAEVTAG GISTANLSSQ
TMMAKCVPGL YAVGEAVDVT GWLGGYNFQW AWASGHAAGQ AL
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