| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_1827 |
|---|
| Symbol | |
|---|
| ID | 4082179 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingopyxis alaskensis RB2256 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008048 |
|---|
| Strand | + |
|---|
| Start bp | 1922795 |
|---|
| End bp | 1923532 |
|---|
| Gene Length | 738 bp |
|---|
| Protein Length | 245 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 638010202 |
|---|
| Product | twin-arginine translocation pathway signal |
|---|
| Protein accession | YP_616872 |
|---|
| Protein GI | 103487311 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.145016 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.195503 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAATGAAT TGATCGATCG CAGGGCATTG CTGGCCGGGC TCGCGGGTGC GGGCGCGGTG
GCCGCCATTC CTGCGCGGGC GCAGCTTCCG AACTGGGTCC GGCAGCCGGT GACGCCGCCG
CCGGTCGATT ATCTGGCCGT AGCGAAGAAG CAGCTTGCGA TGCAGGCGCG CAACATCCCG
CAGACCGACC GCGTCGGTGT CGTCGATTTC GGCCTGCCGT CGTCGCGCCC GCGCTTTGCG
CTGGTCGACA TGGTCGCGGG CACGGTCGAC CTGTTCCCGG TAACGCACGG CCGCGGCTCG
GACCCGCAGC ACGACGGCTG GCTCAAGAGC TTCTCGAACC GCGTCGGCAG CCTCGCGACC
TCACGCGGGG CGTATCGCAC CAGCGATTAT TATTGGGGCG CCAACGGGTC GTCGATGCGG
CTTGCGGGGC TGGAACCCGA CAACAGCAAC GCCGACGTTC GCGCGATCGT CGTCCATGGC
GCCTGGTACG CCGACCCGGC GCTGATCGCG ACGCAGGGCA AGCTGGGGCG CAGCGAGGGC
TGTTTCGTGT TCGGCGAAGA ATTGCTGCCG ATGATCCTCT ACAAGCTCGG CCCCGGACGC
CTGCTCTTCG CCGACCGGCT GAGCGCGCCG CCACCGCTGC CCGCGCCGTT CGACCTGCCC
GCCGACCCGC TGCCGGGGAT GGAAAATCTG CGCCGCGCAA GCAGCGTGAA CGGGCCGCTG
CCGACGACGG CAGACTGA
|
|---|
| Protein sequence | MNELIDRRAL LAGLAGAGAV AAIPARAQLP NWVRQPVTPP PVDYLAVAKK QLAMQARNIP
QTDRVGVVDF GLPSSRPRFA LVDMVAGTVD LFPVTHGRGS DPQHDGWLKS FSNRVGSLAT
SRGAYRTSDY YWGANGSSMR LAGLEPDNSN ADVRAIVVHG AWYADPALIA TQGKLGRSEG
CFVFGEELLP MILYKLGPGR LLFADRLSAP PPLPAPFDLP ADPLPGMENL RRASSVNGPL
PTTAD
|
|---|
| |