Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sala_1783 |
Symbol | |
ID | 4082250 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingopyxis alaskensis RB2256 |
Kingdom | Bacteria |
Replicon accession | NC_008048 |
Strand | - |
Start bp | 1879250 |
End bp | 1882372 |
Gene Length | 3123 bp |
Protein Length | 1040 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 638010157 |
Product | acriflavin resistance protein |
Protein accession | YP_616828 |
Protein GI | 103487267 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG3696] Putative silver efflux pump |
TIGRFAM ID | [TIGR00914] heavy metal efflux pump (cobalt-zinc-cadmium) |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.146507 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCTTGAAC GCCTCGTCCG CTGGAGCCTT GAAAACCGCG CCATCGTTTA TGCCATCGCT GCGCTGCTGA CCGCGTTCGG CGCTTGGACA GCGCTGCGCA CGCCGGTCGA TGTGTTGCCC GATCTGACCG CGCCGACCGT GACAGTGGTG GTCGATGCCG GGGGCTATAC CCCGACCGAG GTGGAGCAGC GCGTCACCAT TCCGCTGGAA ACCGCGCTCA ACGGATCGCC CGGATTGCGG CGCATCCGTT CAAACAGCGC CACCGGCCTC GCAGTGGTGA CGCTGGAGTT CGATTGGGCC ACACCGCCCG AAAGCGCGCG GCGGATCGTA GCCGAACGGC TCCAGACCGC AGGCGACGAA TTGCCCGCCG ATCTGCCTCC GCCGCATATG ACACCGGCCA GTTCCGTGAT GGGCGAGATC ATGTTCGTCG CCCTCAGGTC GAACAGCGCC AGCCCGATGG ATCTCAAATC CACCGCCGAC TGGATCGTGC GCCGCCGCGT CATGTCGGTG CCCGGCATTG CCGAGGTGCT GACCATCGGC GGGGACGAGC GGCAGGTGCA ATTGCTGGTC GATCCGGCGC GGATGTCGGC GCGCGGGATC GGCATGAACC AGGTGATCGA TGCGATGTCG GCTGCCAGCG ACAATCGCAG CGCGGGTGTT GTGGTGGCTA ACGGACAGGA ACTGCTGGTC GAAGGCGTTG GCCGCGCCGC AGTGGCCGAT GATTTCGGCA GTGTCGTGGT GGGCGATGCA GGCGGGGTGC CGGTGCTGGC GCGCGAGATC GGCGATATCC GCATCGGCGA AGGACTGAAA CGCGGTACCG GCGCCTTCAA TGGCAAGCCT GCGGTGATCC TTGCGATCCA GAAACAGCCG GGCGCCAACA CGCTGGAACT CACCGACCGG CTCGATACCG TATTTGCCGA GCTTCAGCGT ACCCTGCCCG ATGGCATGGT GCTGGAAACG CGGGTGTTCA GGCAGGCCGA TTTCATCCAG CGTTCGGTCG ATAACGTCAC CACCGCGCTG ATCGAAGGTC TGGTGCTGGT CGCGGTGATC GTGTTCATCT TCCTCGTCAG CTGGCGTGCC ACCGCGGTGG CGCTGGCGGC GATCCCGGTG TCGGTGGTGA GCGCAATTAT CGTCATCAAT GCCGGCGGGG GCACCATCAA CACCATGACA CTGGGCGGGC TCGCGATTGC GCTCGGCATG CTGGTCGATG ATGCGATCAT CGTGGTCGAG AACGTGGTGC GCCGGTTGCG TCTGGAGCGC GCCAAGCCGA CAGATGAACA GCAAAGTGAT ATTGCGGTGG TCGCAGCGGC GACGGGCGAG GTGCAAGGGG CGATCATATT TGCGACGCTG ATCATCCTGC TGGTGTTCTT GCCAATCTTC GGGCTTTCAG GCATCGAGGG GCGTTTGCTG CAACCGCTGG CGCTGGCGTA TGGAGTTTCG CTGCTGGCAA GCCTTGCGGT CGCGCTGACC CTGACGCCTG CGCTCAGCTA CGACCTGCTC AGCCGCCGCC CCGATGATGT CGGGCACGAG CCGGGATGGG TGATCCGGAT GAAGGCATGG TATGTCGCGC TGCTTGACCG CTGGCTCGAT CGCTGGAGGG TGCTGGCGGT GGGATCGATG GTCATGGTGG TGGTGGCCGG GATCGGAATT GCACTGGCGG GCCGCGCTTT CCTGCCCGAA TTCAACGAAG GCTCGCTGAC AGTCAATGTC ACCACGCTGC CCGGCACCAG CCTTGCCGAT AGTGACCGCG CGGCGAGCGA GGTTGAGGCG GCGCTGCTGT CCCAGCCCGA AGTGCGCACG ACGGCGCGCC GCACCGGCCG AGCGCCGGGC GATCCGCACG CACAGGAAGT GTTCGCCTCG GAAATCGAAG CCAGTTTGAA TGATGAGGGC CGCGACCGTG ACGAATTGCT CGCGGCGCTG CGCGACGCAG TCGGCACGGT GCCGGGGGTG CAGGCGATCT TTGGCCAGCC GATCGGTCAC CGGGTCGATC ACATCCTTTC AGGCGCGCGC GCAAACATTG CGATCAAGGT GTTCGCGCCG GACACCGACA CGCTCCAGCG CGTGTCCACA CAGGTCGAAA ACGCCGTTGC TGCCATTCCC GGCACGGTCG ATGTGCAGCG CGATACGCAA AGCCTGGTGC CCTATTTGCG GGTGCGGCTG CGGCGCGCCG ATCTGGCCAG CTATGGTCTC GCGGTGGAAG ACGTAACCGG CGCGATTGAA GCCGCCATCG CCGGGGCCGA GGTCGGCCAG CTTATCGAGC GCCCGGTGAT CACCGATGTC GTGGTGCGCT ATGATCCGGT GCAATATGCC GATGCCGGGC AGCTTGATAC CATGCTGATC GCAGCTCCGG GCGGACAGCT GATCCCGCTC TCCGCGATTG CCGATGTGGT GCGCGATACC GGCCCGAACG CGATCACCCG TGAGAGCGTG GAGCGGATGC AGCTGGTGCT CGCCAACGTA TCGGGCCGCG ATCTTGGCGC AGTGGTGGCC GATATTGACA CTGCGCTCGA CGGTATCGCT CTGCCGCAGG GCGTTCATAT CGAGATGGCC GGGCAGTTTG AAAGCGCGGC GAGCGCGGGC CGCACACTGC TGGCGCTGGG ACTGATCGTG CTGGTCGGCA TGTTCCTGCT GCTGCAACAG GCGTTCCGCT CGGGCCGCGA TGCGTTGCTG GTGATGATCA ACCTGCCGCT GGCGCTGGTC GGCGGGGTGG TTGGCCTGTG GCTGACTGGC GGGGTGCTTT CGGTGGCGAC CATCGTCGGC TTTATCACGC TGTTCGGCAT TGCCACCCGA AACGGGGTTA TGATGGTGAC GCATATCAAG CATTTGCAAG CAGTCGAGGG CGTAACCGAT CTGGCCGAAG CGGTAAGGCG CGGGTCCGAG GAACGGTTGG TGCCGATCCT GATGACTGCG ATCTCCGCAG GTCTCGCGCT GCTGCCGCTG GCGATTGCAC TGGGCGAGCC GGGGAGCGAG ATTCAGGCGC CTATGGCGAT CGTTATCCTG TGCGGCCTGA CCAGTTCGAC CGTGCTCAAC ATGCTGGTGC TACCCGCGCT TTATCTCAAG GTCACGCGCG ATGGCTGGGG CGTGAAATGG CCTGCACGGC GGCGCGCAGA GAGTGCCGCG TAA
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Protein sequence | MLERLVRWSL ENRAIVYAIA ALLTAFGAWT ALRTPVDVLP DLTAPTVTVV VDAGGYTPTE VEQRVTIPLE TALNGSPGLR RIRSNSATGL AVVTLEFDWA TPPESARRIV AERLQTAGDE LPADLPPPHM TPASSVMGEI MFVALRSNSA SPMDLKSTAD WIVRRRVMSV PGIAEVLTIG GDERQVQLLV DPARMSARGI GMNQVIDAMS AASDNRSAGV VVANGQELLV EGVGRAAVAD DFGSVVVGDA GGVPVLAREI GDIRIGEGLK RGTGAFNGKP AVILAIQKQP GANTLELTDR LDTVFAELQR TLPDGMVLET RVFRQADFIQ RSVDNVTTAL IEGLVLVAVI VFIFLVSWRA TAVALAAIPV SVVSAIIVIN AGGGTINTMT LGGLAIALGM LVDDAIIVVE NVVRRLRLER AKPTDEQQSD IAVVAAATGE VQGAIIFATL IILLVFLPIF GLSGIEGRLL QPLALAYGVS LLASLAVALT LTPALSYDLL SRRPDDVGHE PGWVIRMKAW YVALLDRWLD RWRVLAVGSM VMVVVAGIGI ALAGRAFLPE FNEGSLTVNV TTLPGTSLAD SDRAASEVEA ALLSQPEVRT TARRTGRAPG DPHAQEVFAS EIEASLNDEG RDRDELLAAL RDAVGTVPGV QAIFGQPIGH RVDHILSGAR ANIAIKVFAP DTDTLQRVST QVENAVAAIP GTVDVQRDTQ SLVPYLRVRL RRADLASYGL AVEDVTGAIE AAIAGAEVGQ LIERPVITDV VVRYDPVQYA DAGQLDTMLI AAPGGQLIPL SAIADVVRDT GPNAITRESV ERMQLVLANV SGRDLGAVVA DIDTALDGIA LPQGVHIEMA GQFESAASAG RTLLALGLIV LVGMFLLLQQ AFRSGRDALL VMINLPLALV GGVVGLWLTG GVLSVATIVG FITLFGIATR NGVMMVTHIK HLQAVEGVTD LAEAVRRGSE ERLVPILMTA ISAGLALLPL AIALGEPGSE IQAPMAIVIL CGLTSSTVLN MLVLPALYLK VTRDGWGVKW PARRRAESAA
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