Gene Sala_1768 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_1768 
Symbol 
ID4082080 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp1864453 
End bp1864908 
Gene Length456 bp 
Protein Length151 aa 
Translation table11 
GC content68% 
IMG OID638010143 
ProductMarR family transcriptional regulator 
Protein accessionYP_616814 
Protein GI103487253 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.389161 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCACCC ACCAGCTGAT CATCGCCCTG TTCCAGCGTT TCTGCTGGCT CGACGAAGGG 
TTGCAGGCAC GGCTTCACGC CCGCGGCTGG CCCGACGTCA ACCGGCCACA ATCGATGGTG
ATGACCAATA TCGTCAGCGG CATCGTGCGC CCGTCGGACA TCGCCCGCAA CCTCGGCGTA
CCGCGGCAGG CGATCCACAG CACCATCAAC CAGATGGTGA GGCTCGGGAT CGTCCGGCTC
GACGTCGACC CCGACGACCG GCGGCACATG ATCGTCTCGT TCACCGAAAC CGGCGCCCGG
ATGTGCAAGG ACGCGCAGCG CGCGATGGAT GCGCTCGCCG CACAGATCAC GGCGCGGATC
GGGCAGGACC GGTTCGACGC GCTGTTCGAC GCGCTCGAAG CCGACTGGGG CGACAATATG
GCGGGCGCGC CCGCTCCCCG GCGCGCAGCA TGCTGA
 
Protein sequence
MRTHQLIIAL FQRFCWLDEG LQARLHARGW PDVNRPQSMV MTNIVSGIVR PSDIARNLGV 
PRQAIHSTIN QMVRLGIVRL DVDPDDRRHM IVSFTETGAR MCKDAQRAMD ALAAQITARI
GQDRFDALFD ALEADWGDNM AGAPAPRRAA C