Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sala_1731 |
Symbol | |
ID | 4081193 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingopyxis alaskensis RB2256 |
Kingdom | Bacteria |
Replicon accession | NC_008048 |
Strand | - |
Start bp | 1821946 |
End bp | 1822821 |
Gene Length | 876 bp |
Protein Length | 291 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 638010106 |
Product | dihydrodipicolinate synthase |
Protein accession | YP_616777 |
Protein GI | 103487216 |
COG category | [E] Amino acid transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0329] Dihydrodipicolinate synthase/N-acetylneuraminate lyase |
TIGRFAM ID | [TIGR00674] dihydrodipicolinate synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.457824 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.527965 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTTTCGG GTTCGATTCC CGCCCTGGTG ACGCCATTCC GCGATGGAGC GTTCGACGCG CCCACCTTCG CGCGTCTTGT GGACTGGCAG GTCAAAGAAG GAACGAGCGC ACTGGTTCCG TGCGGCACGA CCGGCGAAAG CCCGACGCTG AGCTTTGACG AACATTATCG CGTGATCGAC TGTTGCATCG AGGCGGCGGC GGGGCGCGTC CCGGTGATCG CCGGCTGCGG ATCGAACGAT ACCGCGACCG CGATCCGCCA TATGCGCCAC GCGCAGGCGT CGGGCGCCGA TGCGGCGCTG ATCGTCGCGC CCTATTACAA CCGGCCGAGC CAGGAAGGGA TGATCGCGCA TTTCAAGGCG CTGGCCGATG CCAGCGACCT GCCGATCGTC GTCTATAATG TCCCCGGCCG CACCGTCGCC GACATCAGCG CCGAAACGAT GTGCAAGCTC GCCGAAATCC CGACCGTCGT GGCGGTCAAG GATGCGAGCG GCGACCTGGC GCGCGTGACC GTCCACCGCA AGGGGGCGCG GCACGGCTTC TGCCAATTGT CGGGCAATGA CGAGCTGTGG CTGCCACACG CGGTGATGGG CGGCGCGGGC TGCATCTCGG TCACCGCCAA TGTCGCGCCG CGCCTCTGCG CCGATTTCGC CGCCGCCTGT GCTGCGGGAG AGTGGACGCG CGCGCTGGCG CTCCATGACC GGCTGTTCGA TTTGCACAAG GCGATGTTCT CCGACACGTC GCCGGGGCCG GTCAAATATG CGCTCTCGCG CGTCCACGAC TGGTTTTCGC CCGAAGTGCG CCTACCTATC ATTCCGGCGT CCGGCGCATC GCGCGCGGTC GTCGACGCCG CGCTGGCGTC GGCAGGAGTG ATTTAG
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Protein sequence | MFSGSIPALV TPFRDGAFDA PTFARLVDWQ VKEGTSALVP CGTTGESPTL SFDEHYRVID CCIEAAAGRV PVIAGCGSND TATAIRHMRH AQASGADAAL IVAPYYNRPS QEGMIAHFKA LADASDLPIV VYNVPGRTVA DISAETMCKL AEIPTVVAVK DASGDLARVT VHRKGARHGF CQLSGNDELW LPHAVMGGAG CISVTANVAP RLCADFAAAC AAGEWTRALA LHDRLFDLHK AMFSDTSPGP VKYALSRVHD WFSPEVRLPI IPASGASRAV VDAALASAGV I
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