| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_1719 |
|---|
| Symbol | |
|---|
| ID | 4081297 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingopyxis alaskensis RB2256 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008048 |
|---|
| Strand | - |
|---|
| Start bp | 1808694 |
|---|
| End bp | 1809179 |
|---|
| Gene Length | 486 bp |
|---|
| Protein Length | 161 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 638010094 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_616765 |
|---|
| Protein GI | 103487204 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3832] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGAAGCCGA CGAAAAAGAC GCGGCGCACC GATCATGCCG AGCGGCTGAT CGCGGCGCCG
CTGGTCGATG TGTTTGCGGC CTTTACCAGC GCCGACACGC TGGCGCGCTG GTTACCGCCG
GATGGGGCGA CGGGGACGTT CGAGCAGGTC GACCTTTGCG CCGGGGGCGG ATTTCGCCTG
CGGCTGACGT TCGACGACCC GGAGGTCGAG ACGAAGAGCG ACGACGACGG CGACGTCGTT
GACGTGCATA TCCCGGTGCT CGACGACGGG CGGCTGATCG TGTGGGAGGT CGCGTTCGAA
TCGGACGACC CGCGCTTTTC GGGAACGATG GCGATGCACT GGTATCTGTC GCGGCAGGGC
GGCGGCACGC TGGTGACGGT CGATGCGCAC CATGTGCCGC CGGGGATTTC GGCGAAGGAC
CATGTGGCGG GGCTGAACTC GTCGCTGGCG AATTTGGCGA GGGTGGTGGA AGGCGCGAGC
AGCTAA
|
|---|
| Protein sequence | MKPTKKTRRT DHAERLIAAP LVDVFAAFTS ADTLARWLPP DGATGTFEQV DLCAGGGFRL
RLTFDDPEVE TKSDDDGDVV DVHIPVLDDG RLIVWEVAFE SDDPRFSGTM AMHWYLSRQG
GGTLVTVDAH HVPPGISAKD HVAGLNSSLA NLARVVEGAS S
|
|---|
| |