| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_1670 |
|---|
| Symbol | |
|---|
| ID | 4081053 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingopyxis alaskensis RB2256 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008048 |
|---|
| Strand | - |
|---|
| Start bp | 1757617 |
|---|
| End bp | 1759563 |
|---|
| Gene Length | 1947 bp |
|---|
| Protein Length | 648 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 638010044 |
|---|
| Product | heavy metal translocating P-type ATPase |
|---|
| Protein accession | YP_616716 |
|---|
| Protein GI | 103487155 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG2217] Cation transport ATPase |
|---|
| TIGRFAM ID | [TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC
[TIGR01511] copper-(or silver)-translocating P-type ATPase
[TIGR01525] heavy metal translocating P-type ATPase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCGACC TCATCGGCGC CTTTTCGACC CTGGGGTTCG AGGCGCACCC GCTGGGCAAC
GGTGCAGATG CAACCGACGT CGGTGCCGAA ACGAGCCGCG AGCTGCTGCG CGCGGTCGCG
GTATCGGGCT TTGCGATGAT GAACATCATG CTGCTGTCGG TGTCGATCTG GTCGGGTGCG
GCGGGTGCGA CGCGCGACCT GTTCCACTGG CTGTCCGCCG CGATCGCGCT GCCGACGATC
ACCTATGCCG GACGCCCGTT TTTCCGCTCG GCATGGCGCG CGCTGCGGCA CGGGGGCACC
AATATGGACG TTCCGATCAG CATCGGCGTC GCGCTCGTCT GTGCTATGAG CCTTTACGAG
ACGGCGTCGA GCGGCCCGCA TGCCTATTTC GATGGCGCGG TGATGCTGCT CTTCTTTCTG
CTCACCGGCC GCTGGCTCGA CAGCGTGATG CGCGACCGCG CGCGGGGCGG AGTCGCGGCG
CTGCTGCGCA ACATGGGGAC GGGCGCGATG GTGATCGGGG TCGACGGGGA CAGCCGATGG
GTCGATGCGA CGGCGCTCGA ACCGGGGATG GAGATGCTGG TGGCGGCGGG CGAACGGCTG
GCCGCCGACG GGGTGGTTGT GGCGGGCGAA AGTCGGTTCG ACCTGTCGCT ACTGACCGGA
GAGAGCGCGC CGGTTGCGGC GCAAGTCGAT GATCGCGTCC ATGCCGGCAC GCTCAATCTC
GACGCGCCGA TCCGCGTGCG CGTCACTGCC GCGGGAGCCG ACACCGCGAT CGCGGACATC
GCGCGGCTTA TGGGCGAGGC GGCGCAGGGC AAGTCGCGCC ATGTCCGTAT CGCCGACCGT
GCCGCGCGCT TCTATGCCCC CGCGGTCCAC GCGCTCGCTC TGCTCGCTTT CGCCGGGTGG
ATGATCGCGG GGGCGGGCTG GCATCAAAGC CTGCTGGTCG CCGCGGCGGT GCTCATCATC
ACCTGCCCCT GCGCGCTGGG CCTCGCCGTC CCGGCGGCGC AGATCGTCGC GGCGGGCGAA
TTGATGCGCG CAGGCGTGCT CGTGAAGGAC GGATCGGCAC TTGAACGGCT GGCCGAGGTC
GACCTCGCGC TCGTCGACAA GACCGGGACG CTGACGCTTG GGCGTCCCGA AGCGATGGGG
CTCGACCGGC TGGACGCGGA GGTGCGCTCG CTGACCCTTG CGCTTGCGCG GGCGAGCCGC
CACCCGCTGA GCGCGGCGTT GACGCGCGAG CTTCAGGCAG GCGGTGTCCG GGCCGCTCGG
GTGGAGGCGA TCCGCGAAAC GCCGGGCGTC GGGATCGAGG CGCGCTGGCG CGGCCGGGTC
GTGACGCTGG GGCGACCGCA GGGCAGCGAT CTTGGCAACG CGCTTGCCAC CGAACTGGCC
GTCGACGGTC GCCCGGTCGC GACGATCACC TTTGCCGACC CTTTGCGCCC TGACGCCGCC
GAGGCGGTCG ATGCCCTGGA GCGGGACGGC GTCGCAGCGA TGATATTGTC GGGCGACCGC
GCCGAAGCCG TCGCGCCGGT TGCCCGCGAC CTGCGCCTGA CGGCGCAGAC GGGGATGAGC
CCGCAGGACA AGCTGGCCGC GATCGCGCGG CAGGCGGCAC GGGGGCGCAA GGTGCTGATG
ATCGGCGACG GGCTCAACGA CGGTCCGGCG CTCGCGGCGG GCCATGCTTC GATGGCGCCG
GGGTCGGCGA GCGATGTCGG CAAGAATGCC GCCGATTGCA TCTTCCTCGG CGACAGGATG
ATGCCCGTGG TGCAGGCGCT CCGTATGGCG CGGCGGACGC AGGCGGTGGT GCGGCAGAAC
TTTCTGCTCG CGATCGGCTA TAATGTCGTC GCGGTGCCGC TCGCCTTCAT GGGGCTGGTC
ACGCCGCTCG TCGCGGCGAT CGCCATGTCG GGATCGTCGC TGATCGTCGT CGGCAATGCG
CTGCGGCTGA AAAGGGCAAT CCGGTGA
|
|---|
| Protein sequence | MPDLIGAFST LGFEAHPLGN GADATDVGAE TSRELLRAVA VSGFAMMNIM LLSVSIWSGA
AGATRDLFHW LSAAIALPTI TYAGRPFFRS AWRALRHGGT NMDVPISIGV ALVCAMSLYE
TASSGPHAYF DGAVMLLFFL LTGRWLDSVM RDRARGGVAA LLRNMGTGAM VIGVDGDSRW
VDATALEPGM EMLVAAGERL AADGVVVAGE SRFDLSLLTG ESAPVAAQVD DRVHAGTLNL
DAPIRVRVTA AGADTAIADI ARLMGEAAQG KSRHVRIADR AARFYAPAVH ALALLAFAGW
MIAGAGWHQS LLVAAAVLII TCPCALGLAV PAAQIVAAGE LMRAGVLVKD GSALERLAEV
DLALVDKTGT LTLGRPEAMG LDRLDAEVRS LTLALARASR HPLSAALTRE LQAGGVRAAR
VEAIRETPGV GIEARWRGRV VTLGRPQGSD LGNALATELA VDGRPVATIT FADPLRPDAA
EAVDALERDG VAAMILSGDR AEAVAPVARD LRLTAQTGMS PQDKLAAIAR QAARGRKVLM
IGDGLNDGPA LAAGHASMAP GSASDVGKNA ADCIFLGDRM MPVVQALRMA RRTQAVVRQN
FLLAIGYNVV AVPLAFMGLV TPLVAAIAMS GSSLIVVGNA LRLKRAIR
|
|---|
| |