Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sala_1659 |
Symbol | |
ID | 4080968 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingopyxis alaskensis RB2256 |
Kingdom | Bacteria |
Replicon accession | NC_008048 |
Strand | - |
Start bp | 1743815 |
End bp | 1745290 |
Gene Length | 1476 bp |
Protein Length | 491 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 638010033 |
Product | glycerol-3-phosphate dehydrogenase |
Protein accession | YP_616705 |
Protein GI | 103487144 |
COG category | [C] Energy production and conversion |
COG ID | [COG0578] Glycerol-3-phosphate dehydrogenase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0674401 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.843721 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTCGACA TCGCCATCAT CGGCGGCGGG GTCAACGGCT GCGGGATCGC GCGCGATGCG GCGGGGCGGG GCGCGCGCGT TCTGTTGCTC GAAGCGCAGG ATCTGGCGAG CGGAACGTCA TCGGCATCGA CCAAGCTGAT CCATGGCGGA CTTCGCTATC TCGAACACCA TGAGTTCGGC CTGGTCCGCG AATCGCTTTC GGAACGCGAG CGTCTGTGGG CGATCGCGCC GCATATCGTG CGACCGATGC GCTTCGTGCT GCCCCATGTG GCCGGATTGC GTCCGCGATG GCTCCTGCGC CTGGGACTGT TTCTTTATGA CCATATCGGC GGACGGAAAC GTCTTCCCGC CACCGAAACG ATCGCCTTGC GCGATCATGT CGCGGGCGCG CCGCTGAAGA ACGGGTTTAC GTCGGGCTTT GCCTATTCGG ACTGCTGGGT CGATGACGCG CGGCTGGTTC TTCTCAATGC GCGCGACGCG GCCGACCGCG GGGCGGATAT TCGCCCGCGC TGCCGTGTCA CGCGCTTCGC GCGGACCGGC GACCATTGGA CGCTCGATAC GCCGGGCGGG CAGTTTCACG CGCATGTCAT CGTCAACGCG GCCGGCCCCG CGGCGCTCGA AGTTTCGCAA CTGGGCGGCG TGGCGACCGG CCGCCGCGTG CGGCTCGTCC GCGGCTCGCA TATCGTCGTG CCCAGGCTCT TCGACCACCA CTACAGCTAT TTTTTCCAGC TTCCCGACGG GCGGATATTT TTCGCCATCC CCTATGAGCG CGACTTCACG CTGATCGGCA CGACCGATCG TGACCATGAC GGCGCTCTGA CCGATGTGCG CGCTTCCGAT GAGGAGATCG CCTATCTGTG CGAGGGGGCC AATCGCTTCT TTCGCAAGAC GATCTCGCCG GCCGATGTGA CCTGGAGCTA TGCAGGGGTG CGGCCGCTGG TCGACGATGG ATCGGGACGG CCCGAGGCGG CGACGCGCGG CTATGATCTG GATCTCTCGT CGGAGAGCGA CGGTCCGGCG CTGCTTTCGG TCTTTGGCGG CAAGATCACC ACCTATCGCC GCCTTGCCGA AGACGCGGTC GATCTGCTTG CGCGCCGCCT GCCCGCATTG ACGGGGACCC GCTGGACCGG CGATGTGCCG CTCCCCGGTG GAGATTTTGC GATCGACGGG TTTGCCGACC TCGCCCAATC GCTGGGCCGC CGCTATGCTT TTCTGCAACC GCCGTGGACC GAACGCCTTG CGCGCAGCTA CGGCACCAGG GCGTTTGACA TTCTGGGCGG CGTCTCGCGG TTCGAGGATT GCGGGCGGCA TTATGGCTCT GGACTCACCG ACCGCGAGGT CGCCTATCTC GTCGAGCAGG AATGGTGCCG CACGGTCGAG GATCTGCTTT GGCGCCGCAG CAAGCTGGGG CTGCATCTCG ACGCCGCGGC GCGGCGTTTG CTTGCCGCCG CTTTTGAAGA AAGGGAATGC GCGTGA
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Protein sequence | MFDIAIIGGG VNGCGIARDA AGRGARVLLL EAQDLASGTS SASTKLIHGG LRYLEHHEFG LVRESLSERE RLWAIAPHIV RPMRFVLPHV AGLRPRWLLR LGLFLYDHIG GRKRLPATET IALRDHVAGA PLKNGFTSGF AYSDCWVDDA RLVLLNARDA ADRGADIRPR CRVTRFARTG DHWTLDTPGG QFHAHVIVNA AGPAALEVSQ LGGVATGRRV RLVRGSHIVV PRLFDHHYSY FFQLPDGRIF FAIPYERDFT LIGTTDRDHD GALTDVRASD EEIAYLCEGA NRFFRKTISP ADVTWSYAGV RPLVDDGSGR PEAATRGYDL DLSSESDGPA LLSVFGGKIT TYRRLAEDAV DLLARRLPAL TGTRWTGDVP LPGGDFAIDG FADLAQSLGR RYAFLQPPWT ERLARSYGTR AFDILGGVSR FEDCGRHYGS GLTDREVAYL VEQEWCRTVE DLLWRRSKLG LHLDAAARRL LAAAFEEREC A
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