Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sala_1644 |
Symbol | |
ID | 4080722 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingopyxis alaskensis RB2256 |
Kingdom | Bacteria |
Replicon accession | NC_008048 |
Strand | + |
Start bp | 1726873 |
End bp | 1727730 |
Gene Length | 858 bp |
Protein Length | 285 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 638010017 |
Product | hypothetical protein |
Protein accession | YP_616690 |
Protein GI | 103487129 |
COG category | [S] Function unknown |
COG ID | [COG3739] Uncharacterized integral membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTGACG GCGCGCGCGG CCACAGCCGC TTCCACGCCG TTCGCTCGCG GCTCGAGGCG ATGGCGGTCG AACCGGGACC GCGCGGCTGG TTCCTCGAGT TCCTCGTCTT CGGATTCAAA CAGGGGTGGG CGTGCCTGTT CGGCGGCCTG ATGCTCGCGC TGCTGCTCGG CACGCATTTC TTCTGGCCCG ACGATGCGCC GCTCCACCGC TATGATGCGA TCACCATCGG CGCGGTGCTG ATCCAGCTCG CGATGCTTGC CTTCCGGCTT GAAACGCCGA AGGAGGCGCT GGTCATCCTG ATCTTCCACA TCGTCGGCAC GGTGATGGAG CTGTTCAAGA CCGCGGCGGG ATCGTGGCAA TATCCCGAGG CGAGTCTGCT TCATATCGGC GCGGTGCCGC TGTTCTCGGG TTTCATGTAT GCCGCCGTCG GCAGCTATAT CGCGCGCGTA TGGCGCATCT TCGACTTTCG CTACACCGGC TATCCGCCCG CGTGGACGAG CTATGTGCTG GCAGCGGCGA TCTATATCAA TTTTTTCGCG CACCATTGGA CCTATGACAT CCGCTGGTTC CTCTTCGCGG CCACCGGCCT GCTCTTCTGG CGCTGTCAGG TCTGGTTCCG CCCGCTCCAC GTCCACCGGC GGATGCCCCT GCTCGTCGGC TGGGGGCTGG TCGCGCTGTT CATCTGGTTC GCCGAAAATA TCGGGACGTT TGCGCGCGCC TGGACCTATC CCAGCCAGAA TGACGGCTGG CATATGGTCG GGCTGGAAAA GCTCGGCAGC TGGTATCTGC TGATGATCAT CTCGTTCGTG CTGGTCAGTC TGGTGCAGCG GCCGAAAGGG CGGAGCACCG CTCCCTGA
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Protein sequence | MSDGARGHSR FHAVRSRLEA MAVEPGPRGW FLEFLVFGFK QGWACLFGGL MLALLLGTHF FWPDDAPLHR YDAITIGAVL IQLAMLAFRL ETPKEALVIL IFHIVGTVME LFKTAAGSWQ YPEASLLHIG AVPLFSGFMY AAVGSYIARV WRIFDFRYTG YPPAWTSYVL AAAIYINFFA HHWTYDIRWF LFAATGLLFW RCQVWFRPLH VHRRMPLLVG WGLVALFIWF AENIGTFARA WTYPSQNDGW HMVGLEKLGS WYLLMIISFV LVSLVQRPKG RSTAP
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