Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sala_1625 |
Symbol | |
ID | 4081898 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingopyxis alaskensis RB2256 |
Kingdom | Bacteria |
Replicon accession | NC_008048 |
Strand | + |
Start bp | 1703813 |
End bp | 1705378 |
Gene Length | 1566 bp |
Protein Length | 521 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 638009997 |
Product | twin-arginine translocation pathway signal |
Protein accession | YP_616671 |
Protein GI | 103487110 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG3540] Phosphodiesterase/alkaline phosphatase D |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.127338 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.599491 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTACAACC GCCGCCATTT CCTTGCCGGA GCGACGCTCG CCGGGCTTGC CGCGCCGGCG ATCGTCCGCG CGCAGGGTAT CTTGCGCGAC TTTCCCTTTC AGCTTGGCGT CGCGGCGGGC GACCCGGCGA GCGATGGTTT CGTCATCTGG ACGCGCCTCG CGCCCGAGCC GATGGAGCGC CACGGCGGGA TGCCGCTGAC CAATGTGCCG GTCGAATGGG AGGTCGCCAG CGACGGCGGC TTTCGCGACG TGGTGGCAAA GGGCACCGCG CTGGCGCGCC CCGAGCTGGC GCACAGCGTC CATGTCGAGG TCGCGGGATT GCAGCCCGAT CGCCCCTATT ATTACCGTTT CACCGCCGCG GGCGAACGCA GCCTGCGCGG GCGCGCGCGG ACGCTTCCCG CGCCCGGCGC GCGTGTCGAT GCGCTGACGT TCGGCGTCGC GGGATGCCAG CATTTCGAGT CGGGCTTTTA CGGCGCCTAT CGCCACATGG CGCGCGAGGA TCTGGCCTTC GTCTATCATT ATGGCGATTT CATCTATGAA TATCGGCAGG ATTATCTGTT CGACGACGGG CTGCCGATCC GCCCGGTGCG CCAATATGCG CAACGCGCGC TGTTCGACCT GACCGATTTC AGAACTGCCT ATGCGCAGAC CCTGCTCGAC ATCGACCAGC AGGCGGTGCG GTCGGTCCAC GCGCATCTGT CGAGCTTCGA CGATCACGAG ATCCGCAACA ATTGGGTGTC CGACCACGAC AATTGGAAAT TGGGGCTCGA CAAGGAAGAC CCCGATGCTG CGTCGCCCGA GATTTTCATG CTCAAGAAAC AGGCGGCGAT GCAGGCGTGG TACGAACATA TGCCCGTGCG CCGGTCGCTG TTGCCACGCG GCGGCATGGT CGCGGCGCAC CGCGAGCTGC GTTATGGCGA CCTGATGGCG ATGCAATTGC TCGACACGCG GCAATATCGC GACGACCAGC CATGCGGCGA CGGCTTCAAA CCCGCCTGCC CCGACGTGTT CGCCAGGGAC CGGCAGGTGC TCGGCAAGGT GCAGGAGGAA TGGCTGGCGC GCAATCTGGC GCGCGGCGGC GCGACGTGGA ACGCGCTGGC GCAGCAGGTG ACGATGATGT CGCTCGACCG GCGGCGGCGG CCCGAAGAGA GTGAAAAGAT CGTCAACCTC GACAGCTGGG CAGGTTATGA GGTGGCGCGG ACGCGGATGT TGTCGCGCTT TGCGGGGCTG AACAACAATA TCGTGCTGAC CGGCGACGAG CATCAGAATT TCTGCGGCGA TCTGGTGCTG AAGGACAAGG TCGTCGGCGC CGAGTTTGTC GCGACATCGA TCTCCAGCGG CGGGGACGGC AGCGACAAGC GCGTCGGCAC CGACGAATGG CTGGCGCGCA ATCCCGAACT CAAATTCGCC AACGACCAGC GCGGTTATCT GGTCTGTGAG GTCAATCGCG AGGCGTGGCA GACGCACTTC ATGGTCGTCG ACAAGGTCTC GACGCCGGTG AACAGCCTGT CGAAACGCGC GACGGGCGTG GTCGAACGCG GCGTTGCGGG CGTGAAGATG GCGTAA
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Protein sequence | MYNRRHFLAG ATLAGLAAPA IVRAQGILRD FPFQLGVAAG DPASDGFVIW TRLAPEPMER HGGMPLTNVP VEWEVASDGG FRDVVAKGTA LARPELAHSV HVEVAGLQPD RPYYYRFTAA GERSLRGRAR TLPAPGARVD ALTFGVAGCQ HFESGFYGAY RHMAREDLAF VYHYGDFIYE YRQDYLFDDG LPIRPVRQYA QRALFDLTDF RTAYAQTLLD IDQQAVRSVH AHLSSFDDHE IRNNWVSDHD NWKLGLDKED PDAASPEIFM LKKQAAMQAW YEHMPVRRSL LPRGGMVAAH RELRYGDLMA MQLLDTRQYR DDQPCGDGFK PACPDVFARD RQVLGKVQEE WLARNLARGG ATWNALAQQV TMMSLDRRRR PEESEKIVNL DSWAGYEVAR TRMLSRFAGL NNNIVLTGDE HQNFCGDLVL KDKVVGAEFV ATSISSGGDG SDKRVGTDEW LARNPELKFA NDQRGYLVCE VNREAWQTHF MVVDKVSTPV NSLSKRATGV VERGVAGVKM A
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