Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sala_1623 |
Symbol | |
ID | 4081896 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingopyxis alaskensis RB2256 |
Kingdom | Bacteria |
Replicon accession | NC_008048 |
Strand | - |
Start bp | 1702552 |
End bp | 1702953 |
Gene Length | 402 bp |
Protein Length | 133 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 638009995 |
Product | MerR family transcriptional regulator |
Protein accession | YP_616669 |
Protein GI | 103487108 |
COG category | [K] Transcription |
COG ID | [COG0789] Predicted transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.473197 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGATGA CGATCGGCAA ACTGGCCGCC GCGGGCGATG TCGGGGTAGA GACGATACGC TATTATCAGC GCCGCGGCCT GATGGGCACG CCCGCGCGCA GCGGCGGCGA CGGCTGGGGC GGCGGCGTGC GCCGCTATGG CGATGATGAT CTCAGACGGC TTAGATTTAT CCGCGCGGCG CAGGCAGCGG GCTTCACGCT CGACGAGATC GGCGAATTGC TCGCGCTCGA CCAGAGCGAC GACCGCGCCC GTGTCCGCGC CCTCGCGCGC CAGCGCATCG ACGCGCTCGA CGCCAAGATC GCCCAGATGA CCGCAACGCG CGCCGCTCTC GCGCGCCTCG CCGATCAATG CGCCGCGAGC GAGACGGGGC CGTGCCCGAT TATGGCGGCG TTCGAGCCCT GA
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Protein sequence | MQMTIGKLAA AGDVGVETIR YYQRRGLMGT PARSGGDGWG GGVRRYGDDD LRRLRFIRAA QAAGFTLDEI GELLALDQSD DRARVRALAR QRIDALDAKI AQMTATRAAL ARLADQCAAS ETGPCPIMAA FEP
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