Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sala_1573 |
Symbol | |
ID | 4082687 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingopyxis alaskensis RB2256 |
Kingdom | Bacteria |
Replicon accession | NC_008048 |
Strand | - |
Start bp | 1645575 |
End bp | 1647077 |
Gene Length | 1503 bp |
Protein Length | 500 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 638009942 |
Product | DegT/DnrJ/EryC1/StrS aminotransferase |
Protein accession | YP_616619 |
Protein GI | 103487058 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0399] Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGTGGTC CCCAACGACA GGTCGACGGT CTGCTGCTGC AAAGCGGTAC GCTCCTGCGC GATGCCCTGG GCCGCCTGAA CGAAACGGGG CTGGGCATTC TGTTGCATGT CGATGCATCG GGGCGTTTTC TTCAGACGGT AACTGACGGC GACATCCGGC GTTTGCTGAT CGCGGGGCTC ACGCTCGATT CGCCGATCGA CCATGTGCGC GATTCGACGT CGATCACCGC CCCCGACGGC ATCGGCGACG AAGCGGCGCT GGCGCTGATG GACAGGCATT CGATCGACCA GCTGCCGCTG TTGGACGGCG CGGGGCGGGT TGTGGGCCTG TATCTGCGTC GCGACCTTGC GACCCGTATT TTCCTGTCCG CCCCGCACAT GAGCGGCGAT GAAATGGATT TCGTTCGCCA AGCCTTTGAA TCGAACTGGA TTGCGCCTCT GGGCCCCAAT GTCGATGCGT TCGAGCGCGA GGTTGCGGCA GCCACTGGCG TTGCCAGCGC GGCGGCCCTT TCGTCGGGAA CCGCGGCGAT CCATCTCGCG CTCATTCTGC TGGGGGTAGG GGCGGGCGAC CGGGTCCTTT GCTCTTCGTT CACCTTTGCG GCGAGCGCCA ATCCGATCCT CTATCAGGCG GCCGAGCCCA TTTTCGTCGA TTCCGAAGAC GGCAGCTGGA ACATGTGCCC CGTGGCGCTG GAAAGGGCAC TGGAGGAATG CCGGCGCGAA GGGCACATGC CCAAGGCCGT GATCATCGTC GATCTTTATG GCCAGCCCGC CGATTATGAT CGCCTGTTGC CGATATGTGA CCGATATGGC GTCCCGGTGA TCGAGGATGC CGCCGAATCG CTCGGATCGA CCCTTCGGGG CCGGTCCTGC GGTAGTTTTG GCCGCGTCGG CATTTTCAGC TTCAACGGCA ACAAGATCAT CACGACATCG GGTGGCGGCA TGCTGGTCGC CGACGACCCG GAGATCACGG CGCACGCCCG CAAGCTGGCG ACGCAGGCGC GCGAGGACGT GCCTTGGTAC GAGCATGTCG AACTGGGCTT CAATTACCGG ATGAGCAACG TTCTGGCAGG AATTGGGCGC GGTCAGATTG CCCGGCTGGA AGAGCGCGTC GCCGCGCGCC GTGCCGTTTT CGACCGCTAT CGCGAGGCGC TGGCGGATGT GGAAAGCTTT GTCTGGATGC CGGAGTTTGC AGGTAGCCAG TCCAACCGGT GGCTGACGAC GGCAACGCTG GCCGACGGGC TGGATCCCGG CGATCTGATC GCGGATCTTG CCAAGCTCGA CATAGAGGCG CGGCATGTCT GGAAACCCAT GCACATGCAG CCGATCTTCG CCGGCTGTCG TTATGTGACG GCCGGGGGCA ACCGCGACGT TGCAGCGGAC ATTTTTTCGC GCGGCCTGTG CCTGCCCTCA GGTTCCAGCA TGACGGCGGC GCAGGTCGAC CGGGTTGCAG AGGCGCTTCG CACGGCTGTC GCACGCGCCC GCCGGGCGAA CCGGGTCGCC TGA
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Protein sequence | MSGPQRQVDG LLLQSGTLLR DALGRLNETG LGILLHVDAS GRFLQTVTDG DIRRLLIAGL TLDSPIDHVR DSTSITAPDG IGDEAALALM DRHSIDQLPL LDGAGRVVGL YLRRDLATRI FLSAPHMSGD EMDFVRQAFE SNWIAPLGPN VDAFEREVAA ATGVASAAAL SSGTAAIHLA LILLGVGAGD RVLCSSFTFA ASANPILYQA AEPIFVDSED GSWNMCPVAL ERALEECRRE GHMPKAVIIV DLYGQPADYD RLLPICDRYG VPVIEDAAES LGSTLRGRSC GSFGRVGIFS FNGNKIITTS GGGMLVADDP EITAHARKLA TQAREDVPWY EHVELGFNYR MSNVLAGIGR GQIARLEERV AARRAVFDRY REALADVESF VWMPEFAGSQ SNRWLTTATL ADGLDPGDLI ADLAKLDIEA RHVWKPMHMQ PIFAGCRYVT AGGNRDVAAD IFSRGLCLPS GSSMTAAQVD RVAEALRTAV ARARRANRVA
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