Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sala_1570 |
Symbol | |
ID | 4082684 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingopyxis alaskensis RB2256 |
Kingdom | Bacteria |
Replicon accession | NC_008048 |
Strand | + |
Start bp | 1642347 |
End bp | 1643105 |
Gene Length | 759 bp |
Protein Length | 252 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 638009939 |
Product | glycosyl transferase family protein |
Protein accession | YP_616616 |
Protein GI | 103487055 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0463] Glycosyltransferases involved in cell wall biogenesis |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCGACA ATCTCGTTTC AATCATCACC CCCGCCTATA AGGCCGCCGA CATCATTGCG GAGACGATTT GTTCGGTCCA GTCGCAAACC CATCGTGAGT GGGAAATGCT GATTGCCGAG GATTGCGGTC CTGACGAAAC GCGCGCGATC GTTCGCGAGT TCGCCCGCGC CGACCCCAGG GTCAGGCTGC TCCAAATGCC GGTCAATGGC GGGCCGGCAG CCGCGCGCAA TCTGGCGCTG TCCACGGCAA AGGGCCGGTG GCTTGCCTTT CTCGACAGCG ACGACCTGTG GCTTCCCGAA AAGCTGGAGC GCCAACTGGC CTTTCATCGC ACCCGCGACG ACGCCGTGAT CAGCTTTACC GGTTTCCGGC GCATCAACGC CGAGGGAAGC GAGACAGGGC GATACATCGG CGTGCCGCCT GTGATGGATT ACAGGGCGCT GCTGGGAAAC ACGGCGATCG CCACCTCGAC CGTCATCGTC GACCGGCAAC AGTCGGGCGA GTTCAGAATG CAGAAGACCT ATTATGACGA TTTCGCATGC TGGCTGGCGC TGCTGCGTAA GGGAAAAGTT GCAATCGGGC TGGACGAGGA CCTGATGCGC TATCGCGTCA TGGCGCAATC GGTCAGCCGG AACAAGGGCA ACAGCGCAAG GCAGGTCTGG CTTGCCTATC GCAATATCGA GAAACTGTCG CCCTTGGCCG CCGCATGGTA TTTTGCCCAA TATTCGGCAC GCGCCTTCCT GAAATATCGC AGATTCTGA
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Protein sequence | MSDNLVSIIT PAYKAADIIA ETICSVQSQT HREWEMLIAE DCGPDETRAI VREFARADPR VRLLQMPVNG GPAAARNLAL STAKGRWLAF LDSDDLWLPE KLERQLAFHR TRDDAVISFT GFRRINAEGS ETGRYIGVPP VMDYRALLGN TAIATSTVIV DRQQSGEFRM QKTYYDDFAC WLALLRKGKV AIGLDEDLMR YRVMAQSVSR NKGNSARQVW LAYRNIEKLS PLAAAWYFAQ YSARAFLKYR RF
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