Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sala_1547 |
Symbol | |
ID | 4082716 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingopyxis alaskensis RB2256 |
Kingdom | Bacteria |
Replicon accession | NC_008048 |
Strand | - |
Start bp | 1613838 |
End bp | 1614866 |
Gene Length | 1029 bp |
Protein Length | 342 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 638009915 |
Product | 2-oxoglutarate ferredoxin oxidoreductase subunit beta |
Protein accession | YP_616593 |
Protein GI | 103487032 |
COG category | [C] Energy production and conversion |
COG ID | [COG1013] Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, beta subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.0421561 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGACCA TCGCGCGGAC GACGACGCTA AAGGATTGGG AAACCGATCA GGAAGTCCGC TGGTGCCCCG GTTGCGGCGA CTATGCGATC CTGAAGGCGG TGCAGCGCAC GATGCCCGAA ATCGGCACCG CGCCCGAGAA CACCGTGTTC GTCAGCGGCA TCGGCTGCTC GTCGCGCTTC CCCTATTATA TGGAAACCTA TGGCTTTCAC ACGATCCACG GTCGCGCGCC GGCGTTTGCG ACGGGGCTGA AGCTCGCCAA TCCGCAGCTC GACATCTGGA TCGTCACCGG CGACGGCGAC GGACTGTCGA TCGGCGGCAA CCACACGATG CACCTCATTC GCCGCAATCT CGATTGCCAG ATCATGCTGT TCAACAACGA GATTTATGGC CTCACCAAGG GGCAATATTC GCCGACCAGT CGCGTCGGCA CGACCAGTCC CTCGACCCCC TATGGATCGG TCGATCGTCC GGCGCAGCCC GCGGCCTTTG CGCTCGGTGC GGGCGCGCGG TTCGTCGCGC GCGGCTTCGA CGTATCGAAG GAATTGCCGA ACGTGCTGAA GGCGGCGCAT GCCCACAAGG GCGCCGCCTT TATCGAGATT TTTCAGAACT GTATCGTCTA TAACAAAGAC GTGTTCGAGG ATTTTGCCGC TCCCAAGGGC GCCGAGGACC GCCAGCTCTG GCTCAAGCAT GGCGAACCGA TGCTCTATGC CAAGGGCACC AAGGGCATCG CGCTCGACGC CGAGGCGCTG CACCTCAAGA CCGTCGAGGT CGTCGACGGC GACTGGCAGG CCGCGGGGGT GATCGTTCAC GACGTCACCA ATCGCAGCGT CGCCCACATG CTCGTCGAGA TGCGCTTCGG CGAGTTTCCG ATGGCGCTGG GCGTCCTCTA CGACGACCCG CGGCCGACCT TCGAGGCCGA TGTCTGGCGC CAGAATGCCG CCGCAGCCGA AGGCAAAACC GCCGACCTGC AAAGCCTGCT CAAGAAGGGA CAAACCTGGA CAGTGACCGA AAAGGGCTCC GAGCTCTGA
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Protein sequence | MTTIARTTTL KDWETDQEVR WCPGCGDYAI LKAVQRTMPE IGTAPENTVF VSGIGCSSRF PYYMETYGFH TIHGRAPAFA TGLKLANPQL DIWIVTGDGD GLSIGGNHTM HLIRRNLDCQ IMLFNNEIYG LTKGQYSPTS RVGTTSPSTP YGSVDRPAQP AAFALGAGAR FVARGFDVSK ELPNVLKAAH AHKGAAFIEI FQNCIVYNKD VFEDFAAPKG AEDRQLWLKH GEPMLYAKGT KGIALDAEAL HLKTVEVVDG DWQAAGVIVH DVTNRSVAHM LVEMRFGEFP MALGVLYDDP RPTFEADVWR QNAAAAEGKT ADLQSLLKKG QTWTVTEKGS EL
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