| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_1528 |
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| Symbol | |
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| ID | 4082427 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | - |
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| Start bp | 1594792 |
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| End bp | 1595694 |
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| Gene Length | 903 bp |
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| Protein Length | 300 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 638009896 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_616574 |
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| Protein GI | 103487013 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.946489 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.396614 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTAAAC GCGCGCATAT CCGGCAATTT CTCGCTGTCG TCGATGCAGG CAGCTTCACG
CAGGCGGCTT TGCGCATCCG TGTCACCCAG CCAGCGCTGT CGGCGGGGAT CGCCGAACTG
GAAAGGCTGG TCGGGACACC GTTGTTCCTG CGCAACCGAC GGCAGATACG CCTGACCGAA
GCGGGCGGCC GTTTCCTGCC GATCGCGCGC GACCTCGACC GCGGATTTCG CGCGGCGGAC
GATTTCGGCC GCACCGGCGA ACAGCAGGCG GCCGAGCTGA AGCTTGGTGT GATCCGGTCG
CTGTCCGGCG AACTGTTGCA GGCGATCGTC GCGGCGCTGC GTCCGAGTTT TGCGATCGAG
ATCGTCGAAA ACGGCGATGC CGAGCTTCGC GCCGCGCTGG GCAGCGCGCG CATCCATATG
GCGATCGGCG GGCTACGTCC CGGCGAGCGC GGGGAGCATG TCACGCCGCT CTATGACGAA
CCGTTGACAA TGTTCGTTGC CGCCGACCAT CCGCTCGTCG GTCGCATCGA AGTCACGCCC
GACGAGCTCG CCGCCGAAAC GATGATCGCG CGGCGTTCGT GCGAGTTTCT GGCCGCCACC
AGCCGCTTTT TCACGCGCCA CGGCGTACGG CCGCGTTTCG CGCTGCGCAG CGAAAGCGAT
GAGCGGTGCC TGCGGATGGT CGCCGCGGGC ATCGGCATCA CCACCGCGCC GGTGTCGCTG
GCGATCGACG GGATCGTGCC GCTCAAGGTC GCGGGCTATG ATTTTCGCCG CGAACTCGGG
CTGATCGCCG ATCCCGCCTG GGCGGCGCTG CCCGACGTGG CGCCGCGGCT GGCGCACGCA
CGCGAGATGA TCGGCGCGAT CGCCGCCGAG TGGCGGCAGG CAAAGGTCGA TCCGGCCTTG
TGA
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| Protein sequence | MIKRAHIRQF LAVVDAGSFT QAALRIRVTQ PALSAGIAEL ERLVGTPLFL RNRRQIRLTE
AGGRFLPIAR DLDRGFRAAD DFGRTGEQQA AELKLGVIRS LSGELLQAIV AALRPSFAIE
IVENGDAELR AALGSARIHM AIGGLRPGER GEHVTPLYDE PLTMFVAADH PLVGRIEVTP
DELAAETMIA RRSCEFLAAT SRFFTRHGVR PRFALRSESD ERCLRMVAAG IGITTAPVSL
AIDGIVPLKV AGYDFRRELG LIADPAWAAL PDVAPRLAHA REMIGAIAAE WRQAKVDPAL
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