Gene Sala_1512 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_1512 
Symbol 
ID4080025 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp1578637 
End bp1580598 
Gene Length1962 bp 
Protein Length653 aa 
Translation table11 
GC content62% 
IMG OID638009879 
ProductK+ potassium transporter 
Protein accessionYP_616558 
Protein GI103486997 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG3158] K+ transporter 
TIGRFAM ID[TIGR00794] potassium uptake protein 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.312861 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.387563 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGCTG AGTCGCAACG GGCGGCCGAG GGCGTGGCAA CCGCCATCGA AGCCGCCGCC 
GAAACCGGCC ATCACGGCCA TGGCCCTCAT GGTGACGGCA AGCTGAAGCT TGCCGTCGGT
GCGGTCGGCG TCGTCTTCGG CGACATCGGT ACCAGCCCGC TCTATGCGTT CCGCGAAACC
TTTGCGGGGC ATCATCCGAT CGAGCCCGAC CGGCTGCATA TCTATGGTGT GCTGAGCCTC
GTTTTCTGGT CGATGATGCT CGTCGTCACC TTCAAATATG TGATGACGAT CATGCGCGCC
GACAACAAGG GCGAGGGGGG CAGCCTCGCG CTGCTCGCGC TGATCAGCCG CTCGTCGGAA
GGCAAGCGCT GGACCTGGCC GATCGTCCTT CTGGGCGTGT TTGCCACCGC CCTCTTCTAT
GGCGACAGCA TGATTACCCC GGCGATGTCG GTGCTTTCGG CGACCGAAGG CCTGTCCTAT
GTCGACAAGG GATTCGAACC CTATATCGTG CCGATCGCCC TGGGCATACT CATCGGCCTG
TTCGCGATCC AGGCGCGCGG GACGGCGAAG GTCGGCGCGC TGTTCGGCCC GATCATGCTG
CTCTATTTCC TGATGCTTGC AGGGCTTGGT ATCCTGCATA TCGGCAATAA TCCGTGGATC
ATCGTCGAGA CGCTCAACCC GGTCAACGCC CTACGATTCT TTTACCTCGA CGGTTTCACG
GCCTTTATCG CGCTCGGCGC GGTCGTGCTC GCGGTGACCG GCGCGGAGGC GCTTTATGCC
GACATGGGGC ATTTCGGTCG CGGGCCGATC GGCCTCTCGT GGCTGAGTTT CGTGCTGCCC
GCGTTGATGC TCAACTATAT GGGACAGGGC GCGATGGTCC TTGCGGCCGA AGCGGGGCCG
CGCACCGAAC TGATTGCCGA TCCCTTTTTC CAGATGATGC CGCAGTTTCT CGAACTGCCC
GTCGTCATCC TCGCGCTGCT TGCGACGATC ATCGCCAGCC AGGCGGTGAT CTCGGGCGCC
TTCTCGCTGA CCCAGCAGGC GATCCAGCTC GGCTTCATGC CGCGCCTGCG GGTCGAGCAC
ACCAGCGCGT CGGCGGCGGG GCAGATATAC ATTCCCATTG TCAACTGGGG GCTGATGGTC
ATGGTGATTC TGCTCGTCCT CGGCTTCGGC TCGTCGAGCA ACCTTGCCGC GGCCTATGGC
ATTGCCGTGA CCGGGGCGAT GTTCATCGAT ACCTGTTTGA TGAGCGTCGT GCTCTTCACA
TTATGGAAAT GGCCGGCATG GAAGGCGCTG CCGGTGCTCG CGGTCTTCTT CATCGTCGAC
ATCGCCTATT TCGGCGCCAA CCTGATCAAG GTGCCCGACG GCGGCTGGGT GCCGCTGGTG
ATCGGGCTCA CCATCTTCAC GCTGCTCACC ACCTGGTCGC GCGGGCGCAA GCTGATGCAG
GAGGAAATGG CCGAGGGTGC GATGCCGATC CCGATTTTCG TGAAGTCGGC TGCGAACAGC
GCGACGCGCG TGCCTGGCAC CGCGGTCTTC ATGACATCGA GCAGCGACGG CGTGCCGCAC
GCGCTGCTCC ACAACCTCAA GCACAACAAG GTGCTGCACG AGCGCATCAT CCTGCTGACG
ATCAAGATTG CCGACGTGCC GTTCGTCCCC GAAAGCAAGC TTTGCCAGCT CGAAGATCTG
GGGCAGGGAT TCCACCGGTT GGTGCTCAAC TATGGTTTCA TGCAGCCGAT CGACGTGCCC
GAGGCGCTGA TGCGGGTGAC GAGCTGTGGC GGTGAGTTCA AGATGCTGGA AACCAGCTTT
TTCCTGTCGC GCCAGACCCT GATTGCGGCG AAGAAACCGG GGATGCCGAT CTGGCGCGAA
AAGCTTTTCG CGTGGATGCT GCGCAATTCG GAAAGCGCGA TGGAATATTT CCGTCTGCCA
AGTAATCGGG TGGTCGAACT GGGTAGCCAG GTCGCGATCT GA
 
Protein sequence
MTAESQRAAE GVATAIEAAA ETGHHGHGPH GDGKLKLAVG AVGVVFGDIG TSPLYAFRET 
FAGHHPIEPD RLHIYGVLSL VFWSMMLVVT FKYVMTIMRA DNKGEGGSLA LLALISRSSE
GKRWTWPIVL LGVFATALFY GDSMITPAMS VLSATEGLSY VDKGFEPYIV PIALGILIGL
FAIQARGTAK VGALFGPIML LYFLMLAGLG ILHIGNNPWI IVETLNPVNA LRFFYLDGFT
AFIALGAVVL AVTGAEALYA DMGHFGRGPI GLSWLSFVLP ALMLNYMGQG AMVLAAEAGP
RTELIADPFF QMMPQFLELP VVILALLATI IASQAVISGA FSLTQQAIQL GFMPRLRVEH
TSASAAGQIY IPIVNWGLMV MVILLVLGFG SSSNLAAAYG IAVTGAMFID TCLMSVVLFT
LWKWPAWKAL PVLAVFFIVD IAYFGANLIK VPDGGWVPLV IGLTIFTLLT TWSRGRKLMQ
EEMAEGAMPI PIFVKSAANS ATRVPGTAVF MTSSSDGVPH ALLHNLKHNK VLHERIILLT
IKIADVPFVP ESKLCQLEDL GQGFHRLVLN YGFMQPIDVP EALMRVTSCG GEFKMLETSF
FLSRQTLIAA KKPGMPIWRE KLFAWMLRNS ESAMEYFRLP SNRVVELGSQ VAI