Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sala_1460 |
Symbol | |
ID | 4081271 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingopyxis alaskensis RB2256 |
Kingdom | Bacteria |
Replicon accession | NC_008048 |
Strand | - |
Start bp | 1514567 |
End bp | 1516138 |
Gene Length | 1572 bp |
Protein Length | 523 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 638009825 |
Product | beta-lactamase |
Protein accession | YP_616506 |
Protein GI | 103486945 |
COG category | [V] Defense mechanisms |
COG ID | [COG1680] Beta-lactamase class C and other penicillin binding proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0171679 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACGCC TGCTCGTCCT CACGCTCTTC GTATCGCTCG CGATGCCCGC GTGGGCCGAA CCGCCCGCCG ACATCGCCGA AAGCGTCGAG GCGCTGCGGC AGAAAATCGG CGCGCCGGGC GTGTCGATCG CGATCGTAGA GGACGGCAAG ACGACGCTGG CGCGCGGCTG GGGCGTGCGC AAGCTGGGCG AAGCGGCGCC GGTCGATGCC GAGACGATTT TCCAGACCGG ATCGACCGGC AAGGCGATGA CCGCGGCGGC GCTCGCCGTG CTCGTCGATG AAGGCAAGAT CGGCTGGGAC GATCCGGTCA TCCAGCATAT GCCCTGGTTC CGCATGTACG ACCCGTGGGT CACGCGCGAG ATCACGATCC GCGACCTGCT CGTCCACAGG AGCGGGCTGG GGCTGGGGCA GGGCGATTTG ATGTTCGTGC CGCGCACGCA TCTGACGCGC AAACAGACGG TCGAGCGCGT CGCCTATTTG AAGCCCAAGA CCAGTTTCCG TTCGGCCTAT GCCTATGACA ATATCCTCTA CGCCGTCGCG GGCCAGCTGA TCGAGGAAGT CACCGGACAG ACGTGGGAGG ATTTCATCCG CGCGCGCGTG CTGCGTCCGG GCGGCATGAA AAATGCCACG AGCGACAGCG AGGAACGCTT CGCGACGCCG AACCGCAGCT GGCCGCACGC GCGCCTGTCC GGCCCATTGC GCGGCATCGG CCCGCAGCAG ACGCTCGACG AGCGCGACGA GCTGGGCCGC AACGGTGCGC CCGCGGGCGG GCTCGCGCTC AGCGCCGACG ATATGGCGGC GTGGCTCCGC ATCCAGCTCG CGCATGGTGC ATTACCCGAC GGGAAGCGGC TGTTCAGTGA AAAGCAGGCG ATGGAGATGT GGGCGCCGGT GACGCCGATG CCGATCACCC CGCTGCCCGA TGCGCTCAAG CCCGCGCAGC CGACGCAGCA GGCCTATGCG CTCGGCTGGC AGGTGCAGGA TTATCGCGGT CATCGCATCA TCCAGCATGG TGGCGGCGTA TTCGGGTCGA TCACCCGCGT CGTGCTGATC CCCGACAGAC AAGTCGGTTT CGCGATCATG ATGAACAGCG AGGATAGCGG GATGCTCCTC GGCCTCACCT ATGATTTGCT CGACCATTAT CTCGATCAAC CCGACTATGG CTGGATCCAG AAATGGGAGG ACTGGTATCA GTCGGGGCTC GCGGGGGGAG TCGAGTTTCT GAAACAGTCG AAGGCCTCGC CAGCGCAGAG CGGTCCCTCG CTTGCGTTGG CGCGCTATGC CGGGCGCTAC CGCGATCCCT GGTATGGCGA TGTCGTGATC GGTTCGGACA GGAAGGGGTT GACGATCGAT TTTGCTTCGA CGCCGCGGAT GGCGGGGCGG CTCGATCACT GGCAATATGA CAGCTTCGTC ACCAGGTTCG ACGACCCGGC GATCGAACCC GCCTATGTCA CTTTCGCGCT CGACGCCGAT GGCGAGATAA CCGGCGTGAC GATGAAAGCG GTGAGCAAGA TTGCCGACTT CAGCTGGGAT TATCACGATC TCGACCTGAA GCCCGTGGAG GACAAGAAGT GA
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Protein sequence | MKRLLVLTLF VSLAMPAWAE PPADIAESVE ALRQKIGAPG VSIAIVEDGK TTLARGWGVR KLGEAAPVDA ETIFQTGSTG KAMTAAALAV LVDEGKIGWD DPVIQHMPWF RMYDPWVTRE ITIRDLLVHR SGLGLGQGDL MFVPRTHLTR KQTVERVAYL KPKTSFRSAY AYDNILYAVA GQLIEEVTGQ TWEDFIRARV LRPGGMKNAT SDSEERFATP NRSWPHARLS GPLRGIGPQQ TLDERDELGR NGAPAGGLAL SADDMAAWLR IQLAHGALPD GKRLFSEKQA MEMWAPVTPM PITPLPDALK PAQPTQQAYA LGWQVQDYRG HRIIQHGGGV FGSITRVVLI PDRQVGFAIM MNSEDSGMLL GLTYDLLDHY LDQPDYGWIQ KWEDWYQSGL AGGVEFLKQS KASPAQSGPS LALARYAGRY RDPWYGDVVI GSDRKGLTID FASTPRMAGR LDHWQYDSFV TRFDDPAIEP AYVTFALDAD GEITGVTMKA VSKIADFSWD YHDLDLKPVE DKK
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