| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_1341 |
|---|
| Symbol | |
|---|
| ID | 4082809 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingopyxis alaskensis RB2256 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008048 |
|---|
| Strand | - |
|---|
| Start bp | 1402346 |
|---|
| End bp | 1402705 |
|---|
| Gene Length | 360 bp |
|---|
| Protein Length | 119 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 638009707 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_616388 |
|---|
| Protein GI | 103486827 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3575] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.0267893 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.175308 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGCCTTCAA CGGCGATTAG AGCGGCGTGC TGGATGAACG TGGATAAGCA CGCAACTCTT
GGGGCGCTTC TATCCAGCGA TCCGCCGCGA ATGGAAGCAT TGGCAGCTGT CGCTGCCCTG
AAACTTCCAG ACTGCTGGAT CAGAGCGGGC TTCGTTCGAG ACGCTGTATG GGATCATCTA
CGCGGGCGTG CCCCGACTTT TCCACAAGCA GATGTTGATG TGGTCTGGTT CGCGCCGGAG
ATGGCGAGTG CGAAAGTCGA TCGGGATATC GAGCAACGGC TGCATGCCTA TGTCCCGCGA
TACAATTGGT CGGTCAAAAA TCAGGCGCGG ATGCACCACC GCAATCATGA TGCGCCCTAG
|
|---|
| Protein sequence | MPSTAIRAAC WMNVDKHATL GALLSSDPPR MEALAAVAAL KLPDCWIRAG FVRDAVWDHL
RGRAPTFPQA DVDVVWFAPE MASAKVDRDI EQRLHAYVPR YNWSVKNQAR MHHRNHDAP
|
|---|
| |