| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_1338 |
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| Symbol | |
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| ID | 4082805 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | + |
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| Start bp | 1400358 |
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| End bp | 1401074 |
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| Gene Length | 717 bp |
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| Protein Length | 238 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 638009703 |
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| Product | TonB-like protein |
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| Protein accession | YP_616385 |
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| Protein GI | 103486824 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0810] Periplasmic protein TonB, links inner and outer membranes |
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| TIGRFAM ID | [TIGR01352] TonB family C-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.101224 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCATATT CAGGGCAGGT TTCCCGGCCG CAAAAGTTTC TGTCGGGCGG TGCGGCGCTG
GTCGCGGCGC TTGCCATCGG TTTCGGCCTC GCGCGCGGGC TCGACCTCGA TGTTGTGCGC
CGCGCGAGCG CGGCGATCAC CGCGATTGCC CTGCCCGCTC CGCGCGACGC GACGGTTCCC
GCGTCGGCGC CCAGTGAGCG CGCCGCGGGC AAGGCCTCGG CGGCGAACAG GCAGGCGAAA
GCCGCCGCAG TCGCCGCGCC GCCCCCGAAA CTGCCGCCGC TCACTCCGCC GGTCGCGGCG
GCGCCGCAAC CTGGCGCCGG TAACGCCCCC GCCGCCGGAG CAACGCCCGA CCCCGGTCCC
GGATCGGGCG CGGGCGGCCG CGGCGATGGC ACTGGCGCCG GTGGTTCGGG TATCGGAACG
GGCGGCGGAA CCAGGGCTGC GTGGCGCAGC GGCACGATCC GCGACCGCGA CTATCCGCGC
GACGCCAGCC GCGAGCGCGC AGGCGGCGAG GTCGAGGTGC GCTTCACGAT TGAGGCCAAC
GGCCGCGTCA CCGGGTGCCG CGTTACAAGG TCGAGCGGCA ACGCCGCGCT CGACCGGACG
ACCTGCGACC TCATCGAAGC GCGCTTCCGC TTCAAGCCCG CGACGAATGC CGCGGGCGAG
CCCATCGCCA GCCCCTATGG CTGGCGCCAG CGCTGGTGGC TGGAGCCGCG CGGCTAG
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| Protein sequence | MAYSGQVSRP QKFLSGGAAL VAALAIGFGL ARGLDLDVVR RASAAITAIA LPAPRDATVP
ASAPSERAAG KASAANRQAK AAAVAAPPPK LPPLTPPVAA APQPGAGNAP AAGATPDPGP
GSGAGGRGDG TGAGGSGIGT GGGTRAAWRS GTIRDRDYPR DASRERAGGE VEVRFTIEAN
GRVTGCRVTR SSGNAALDRT TCDLIEARFR FKPATNAAGE PIASPYGWRQ RWWLEPRG
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