Gene Sala_1294 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_1294 
Symbol 
ID4082586 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp1353376 
End bp1354161 
Gene Length786 bp 
Protein Length261 aa 
Translation table11 
GC content63% 
IMG OID638009656 
Productpantothenate kinase 
Protein accessionYP_616341 
Protein GI103486780 
COG category[K] Transcription 
COG ID[COG1521] Putative transcriptional regulator, homolog of Bvg accessory factor 
TIGRFAM ID[TIGR00671] pantothenate kinase, type III 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGCTCG CGATCGACGT CGGCAACACC AACGCCAAAT TTGCGCTGTT TCGCGGGGCC 
GAGCTGCTCG CGCGCTGGCG CATCGCGACC GACGACCGGC GCACCGCCGA CGAATATATG
GTGTGGCTCG ATCAGTTGAT GCGGATCGAG GGGTATGATC GCGGCGACGT CGATGCCGTG
ATCATCTCGA CCGTGGTGCC GCGCGCGCTG CACAATCTGC AACTACTGGC TCACAAATAT
TTCGGCGTCG ATGCGCTGGT TGCCGGTCGC GAACCCGTCA CATGGGGCAT CGCATTGAAG
GTTGACGAGC CGCAGTCGGT CGGCGCCGAC CGCGCGGTCA ATGCGATCGC GGCACAGGCG
GTCGAGCCCG GCAGGGACAA ACTTGTGATC AGCTTCGGCA CTGCCACGAC GCTCGACCAT
ATCGGCCCCG ACGGCGCCTA TCTGGGCGGC ATCATTGCGC CGGGTGTCAA CCTGTCGCTC
GAAGCGCTCG TCGCTGCGGC CGCCAAGCTG CCGCGCATCG CGATCGAGGC GCCCGCGAGC
GCCAGCGTGA TCGGGCGTAC CACCGAAAGC CAGATGCTGA TCGGCGTCTA TTGGGGCTAT
GTCGCAATGA TCGAAGGGCT GATAGCGCGC ATGAAGGCGC AGATCGGCAA GCCGCTTGTC
GTGGTCGCGA CCGGCGGCCT CGCGACACTT TTTCAGGAAC AGGCCCATCT GTTCGATCGT
ATCGAACCCG ATTTGACGCT GAACGGGCTC ATGCACCTCT ATAACCAAGG ACAACAAAAG
ATATGA
 
Protein sequence
MLLAIDVGNT NAKFALFRGA ELLARWRIAT DDRRTADEYM VWLDQLMRIE GYDRGDVDAV 
IISTVVPRAL HNLQLLAHKY FGVDALVAGR EPVTWGIALK VDEPQSVGAD RAVNAIAAQA
VEPGRDKLVI SFGTATTLDH IGPDGAYLGG IIAPGVNLSL EALVAAAAKL PRIAIEAPAS
ASVIGRTTES QMLIGVYWGY VAMIEGLIAR MKAQIGKPLV VVATGGLATL FQEQAHLFDR
IEPDLTLNGL MHLYNQGQQK I