Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sala_1280 |
Symbol | |
ID | 4082531 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingopyxis alaskensis RB2256 |
Kingdom | Bacteria |
Replicon accession | NC_008048 |
Strand | - |
Start bp | 1337701 |
End bp | 1338180 |
Gene Length | 480 bp |
Protein Length | 159 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 638009640 |
Product | cyclase/dehydrase |
Protein accession | YP_616327 |
Protein GI | 103486766 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG2867] Oligoketide cyclase/lipid transport protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGCCAAGGC ACCACGAAAC GCGCGATCTG CCGTACAGCG CCGAACAGAT GTTCGCGCTG GTGACCGATA TCGCACGCTA TCCCGAGTTC CTGCCGTGGG TCATTGCGCT CCGCATCCGC AGCGACAGCG AGCATGAGTC GGTCGCCGAC ATGATCGTCG GCTTCAAGGG GCTGCGCGAG AGCTTTTCGT GCCGCGTCCA CAAGCAGCGA CCGCACGAGG TCATCGTCAG CTATATCGAC GGCCCGATGA AGCATCTCTC CAACGAATGG CATTTCCAGC CCGCCGCGGG CGGCGGCTGC CGCGTCGACT TCATGGTCGA TTTCTCGTTC CGCAACCGGA TGTTCGAGGC GCTCGCCGGA CAGATGTTCG ACAAGGCGCT CCGAAAGATG ATCGCGGCGT TCGAGGCACG CGCCGACGAA CTTTACGGTG CGGGGAGCGC GACATCCTCC GAAGGACGCA GCGCGTCCTT TTCGGGCTGA
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Protein sequence | MPRHHETRDL PYSAEQMFAL VTDIARYPEF LPWVIALRIR SDSEHESVAD MIVGFKGLRE SFSCRVHKQR PHEVIVSYID GPMKHLSNEW HFQPAAGGGC RVDFMVDFSF RNRMFEALAG QMFDKALRKM IAAFEARADE LYGAGSATSS EGRSASFSG
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