Gene Sala_1280 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_1280 
Symbol 
ID4082531 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp1337701 
End bp1338180 
Gene Length480 bp 
Protein Length159 aa 
Translation table11 
GC content63% 
IMG OID638009640 
Productcyclase/dehydrase 
Protein accessionYP_616327 
Protein GI103486766 
COG category[I] Lipid transport and metabolism 
COG ID[COG2867] Oligoketide cyclase/lipid transport protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCCAAGGC ACCACGAAAC GCGCGATCTG CCGTACAGCG CCGAACAGAT GTTCGCGCTG 
GTGACCGATA TCGCACGCTA TCCCGAGTTC CTGCCGTGGG TCATTGCGCT CCGCATCCGC
AGCGACAGCG AGCATGAGTC GGTCGCCGAC ATGATCGTCG GCTTCAAGGG GCTGCGCGAG
AGCTTTTCGT GCCGCGTCCA CAAGCAGCGA CCGCACGAGG TCATCGTCAG CTATATCGAC
GGCCCGATGA AGCATCTCTC CAACGAATGG CATTTCCAGC CCGCCGCGGG CGGCGGCTGC
CGCGTCGACT TCATGGTCGA TTTCTCGTTC CGCAACCGGA TGTTCGAGGC GCTCGCCGGA
CAGATGTTCG ACAAGGCGCT CCGAAAGATG ATCGCGGCGT TCGAGGCACG CGCCGACGAA
CTTTACGGTG CGGGGAGCGC GACATCCTCC GAAGGACGCA GCGCGTCCTT TTCGGGCTGA
 
Protein sequence
MPRHHETRDL PYSAEQMFAL VTDIARYPEF LPWVIALRIR SDSEHESVAD MIVGFKGLRE 
SFSCRVHKQR PHEVIVSYID GPMKHLSNEW HFQPAAGGGC RVDFMVDFSF RNRMFEALAG
QMFDKALRKM IAAFEARADE LYGAGSATSS EGRSASFSG