| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_1275 |
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| Symbol | |
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| ID | 4082526 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | - |
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| Start bp | 1332420 |
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| End bp | 1333838 |
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| Gene Length | 1419 bp |
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| Protein Length | 472 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 638009635 |
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| Product | two component, sigma54 specific, Fis family transcriptional regulator |
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| Protein accession | YP_616322 |
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| Protein GI | 103486761 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | [TIGR01818] nitrogen regulation protein NR(I) |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.0891685 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGAAG GCAAGACGAT CCTGCTGGTC GAGGACGATC CGGCGATCGC GATGGTCATC
CGCGAAACGC TCGACGGCGA ATGCGGCCTT CTCGCGTCGG TCGGCAGCAT CGCCGAACGC
AACGCCTGGC TCGCCGCTCA CCGCGCCGAC CTCATCATCA CCGATGTTGT CCTGCCCGAT
GGCGACGGCA TCGACTCGCT GGTCCATGCC GGAGTCGATC CTGCAACGCC GGTGATCGTG
CTGTCGGCCC AGAATACGCT CGACACCGCG GTCCGGGCGA CGGGCATCGG CAGCTATGAT
TATCTGCCCA AGCCCTTCGA CCTCGACGAA CTGACCGCCA GCGTCCGCGC CGCGCTGCAA
CGCCGCGTCG AGGCAGCCGC GAGCGACGCC CCGCCGCCTG CCGACAGCCA CGGCCTCGTC
GGCCGCGCGC CGGCGATGCA GGCGGTTTAC CGGACGATCG CCCGGCTCGC GACGAACGAT
CTCGCGGTGC TGATCCTCGG CGAGTCGGGG ACAGGCAAGG AGGTCGTTGC GCGCGCGATT
CACGCCACCG GGCTGCGCCG CGACGGCCCC TTCGTCGCGA TCAACATGGC GGCCATCCCG
CGCGAACTGA TCGAGGCCGA ACTGTTCGGT CATGAAAAGG GCGCCTTTAC GGGCGCGCAC
AGCCGCAATG CTGGCCGCTT CGAACAGGCG GCGGGCGGAA CCTTGTTCCT CGACGAGATC
GGTGACATGC CCCTGGAGGC GCAGACGCGG CTATTGCGCG TGCTGCAAAG CAACGAGTAT
TCGACCGTCG GCGGCAGCCA GGCGCTCCGC GCCGATGTGC GCGTGATCGC CGCGACGCAC
CGCGACATGC GCACGCTCGT CGCCGACGGT CGCTTTCGCG AAGATCTCTT TTACCGGCTC
AACGTCATCC CTGTGACCTT GCCGCCGCTG CGCGACCGCC GCAGCGACAT TGCTGCGCTC
GTTCGCCATT TTGTCGAGGT CGGGCGCGGA TCGGGGCTTC CCGACCGGCA GTTCGCGCCC
GAAGCGATGC AATGGCTCGA ACGCCACGAC TGGCCGGGTA ATGTCCGTGA GCTGGGCAAT
GTGGTGCAGC GACTCGCGGT GCTGTCGCGC GATACCGTCG TCACCGCACG CGAGGTCGAG
ATGGTGCTGC GCGACAATGA CGAAAGCGGC GGCGTGGCCG ATCCCGCGGC ACTGATCGCG
CGCGCCGTCG ACGACTGGGC GCGCGAAAAG ATGGCGAGCG CCGAACCCGA CGGCGGGATT
CACGGCCAGC TCGAGGCGAT CGTCGAGGCC GCACTGTTCC GCCGCGTGCT GCGCGATGTG
CGCGGCAACC AGCTGGAGGC GGCGCGGCGT CTCGGCATCA ACCGTAACAC GCTGCGCAAG
CGCCTCGCTC AGCTGGAAAT CGATCCGCTG CATCCCTGA
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| Protein sequence | MSEGKTILLV EDDPAIAMVI RETLDGECGL LASVGSIAER NAWLAAHRAD LIITDVVLPD
GDGIDSLVHA GVDPATPVIV LSAQNTLDTA VRATGIGSYD YLPKPFDLDE LTASVRAALQ
RRVEAAASDA PPPADSHGLV GRAPAMQAVY RTIARLATND LAVLILGESG TGKEVVARAI
HATGLRRDGP FVAINMAAIP RELIEAELFG HEKGAFTGAH SRNAGRFEQA AGGTLFLDEI
GDMPLEAQTR LLRVLQSNEY STVGGSQALR ADVRVIAATH RDMRTLVADG RFREDLFYRL
NVIPVTLPPL RDRRSDIAAL VRHFVEVGRG SGLPDRQFAP EAMQWLERHD WPGNVRELGN
VVQRLAVLSR DTVVTAREVE MVLRDNDESG GVADPAALIA RAVDDWAREK MASAEPDGGI
HGQLEAIVEA ALFRRVLRDV RGNQLEAARR LGINRNTLRK RLAQLEIDPL HP
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