| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_1259 |
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| Symbol | |
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| ID | 4080274 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | + |
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| Start bp | 1311461 |
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| End bp | 1313044 |
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| Gene Length | 1584 bp |
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| Protein Length | 527 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 638009619 |
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| Product | methionyl-tRNA synthetase |
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| Protein accession | YP_616306 |
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| Protein GI | 103486745 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0143] Methionyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00398] methionyl-tRNA synthetase |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0649493 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCCAAC AGAGCGCTCC CTTCTATATC ACCACCGCGA TCAGCTATCC CAACGGCCGC
CCGCACATCG GCCACGCCTA TGAAGCGATC GCCACCGACG TCATGGCGCG GTTCCAGCGC
GCGCGCGGCC GCAACGTCCG GCTGGTGACC GGCACCGACG AACATGGGCT GAAGATGTTT
CAGACCGCGC GTGACCAGGG GCGCGCGACG ATCGATCTGG CAAATGAAAT GTCCGGATAT
TTCCGGGAGA TGTATGCCAA GTTGAATATC AGCTATGATA TGTTCATGCG CACGTCCGAT
CCGGCGCACC ACGCCGCCTC GCAGGCGATC TGGAAGGCGA TGGAAGCCAA TGGCGACCTT
TATCTCGACC GCTATGAGGG TTGGTATTCG GTTCGCGACG AAGCCTTTTA CGATGAGAGC
GAGCTGACCG ACGGGGGGGA GGGCATCCGC CTTTCGCCGC AGGGCACGCC GGTCGAATGG
ACCGTCGAGG AAAGCTGGTT CTTCCGCCTG TCGAACTATC AGGATCGGCT GCTCGCGCTC
TATCGCGACA ATCCCGACTT CATCCGCCCC GAAAGCCGCC GCAACGAGGT GCTGCGCTTC
GTCGAGGGCG GTTTGAAGGA TTTGAGCGTC TCGCGCACCA GTTTCGACTG GGGGGTTCCG
GTGCCGGGAT CGCCGGGGCA CGTCATGTAT GTCTGGGTTG ATGCGCTGAC GACCTATTTG
TCGGGGCTGG GCTATCCCGA CCCGGCGAGC GACTTCGGCA CATTCTGGCC CGCGAACATT
CATATGATCG GCAAGGATAT CGTTCGTTTT CATACTGTTT ACTGGCCGGC CTTTCTGATG
AGTGCCAATC TGCCGCTGCC TCGCCAGGTG TTCGGCCACG GCTTTCTGCT CAACCGCGGC
GAAAAAATGT CGAAGTCGCT CGGCAATGTC GTCGATCCGA TGGCGCTCGC CGAGCGGTTC
GGCGTCGATG CGCTGCGCTA TTATCTGCTG CGCGAGGTCA GCTTCGGACA GGACGGCAGC
TATTCGGCCG AAGCGATCGT CCGCACCGCC AACGCCGACC TCGCCAACAG CTTTGGCAAT
CTGGCGCAGC GCAGCTTGTC GATGATTTTC AAAAACTTGG GCGGTGAACT TTCGGCTGAC
TATACTCCGG CACAGGATGA TATTGATCTG TTCCACTTGG TCAATCTCAG CGCAAAAGAC
CTATTACCTC GGGCGTTCGA ACAACTGGCC TTTTCGGTCG GGATCGAGGA GTGGCTGCGC
GCTGTCTTCG CCTGCAACCA ATATGTCGAT GCGCAGGCCC CTTGGGCGTT GCGCAAGAGC
GATCCCGAAC GCATGCGCGT CGTTCTGATG ACGCTGTTCC AGGCCGTGCG CACGCTCGCC
ATTGCCATTC GGCCCGTCGT GCCGACGGCG GCCGACAATC TGCTCGATCA GATGGGCATT
GCCCCCGACG CGCGTGATTT TGCGGCGCTG GCCGACGCCG ACTGGTTCGC CAGACTGGCG
GCGAGCGGTT TCACGGTCGG GCAGCCCGTG CCGATCTTTC CGCGCCTCGA CCTGCCCGAA
GAGGAGGGGG AAGGGGAGGC GTGA
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| Protein sequence | MSQQSAPFYI TTAISYPNGR PHIGHAYEAI ATDVMARFQR ARGRNVRLVT GTDEHGLKMF
QTARDQGRAT IDLANEMSGY FREMYAKLNI SYDMFMRTSD PAHHAASQAI WKAMEANGDL
YLDRYEGWYS VRDEAFYDES ELTDGGEGIR LSPQGTPVEW TVEESWFFRL SNYQDRLLAL
YRDNPDFIRP ESRRNEVLRF VEGGLKDLSV SRTSFDWGVP VPGSPGHVMY VWVDALTTYL
SGLGYPDPAS DFGTFWPANI HMIGKDIVRF HTVYWPAFLM SANLPLPRQV FGHGFLLNRG
EKMSKSLGNV VDPMALAERF GVDALRYYLL REVSFGQDGS YSAEAIVRTA NADLANSFGN
LAQRSLSMIF KNLGGELSAD YTPAQDDIDL FHLVNLSAKD LLPRAFEQLA FSVGIEEWLR
AVFACNQYVD AQAPWALRKS DPERMRVVLM TLFQAVRTLA IAIRPVVPTA ADNLLDQMGI
APDARDFAAL ADADWFARLA ASGFTVGQPV PIFPRLDLPE EEGEGEA
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