| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_1238 |
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| Symbol | |
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| ID | 4080309 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | + |
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| Start bp | 1287056 |
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| End bp | 1288390 |
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| Gene Length | 1335 bp |
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| Protein Length | 444 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 638009598 |
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| Product | amidohydrolase |
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| Protein accession | YP_616286 |
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| Protein GI | 103486725 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG1228] Imidazolonepropionase and related amidohydrolases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0871897 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAATCCA GAGTGAAGTT GCGCAGCTTT CTGCGGGTTA TGCGAATCGG CGGCATCGCG
CTTCTGGGCG CAGTGGGCAC GGGCACCGCG GCACAGGAGG CGCCGTCGCA GACGGTCATC
ACCGCCGCGC GCTACATCGA CGTGCTGAGC GGCAAGACGG TCGAGCACCC CGCAATCTTC
GTCGGCGCCG ATGGCCGCAT CACCAATATC GCCGACGCGC GCACCGTCCG CTGGGGTAGC
GACGTCAAGC ATATCGACCT CGGCGGCAAG ACTTTGCTCC CCGGCCTTAT CGACATGCAC
GTCCACCTCG ACGGTCCTGC CGACATCGGC GGCTATCGCG GGCTGGAGTT CACCGACAGC
TTCTGGGGCA TGACCGCCGT CAAGAACGCG AACGACATGC TGAACGCCGG TTTCACGACG
GTGCGCAACG TCGGATCGGG CGACCGCAAC GACATCGGCC TCAAACAGGC GATCGATTCG
GGTTACGCGA CCGGCCCGCG CATCGTTCCC GCGGGCTATG CGCTCGGCGC GACCGGCGGG
CATTGCGACA GCACTTTCCT CCCTCCCAGC CTGGAAAAAA AGGACGGCAA GGAAGAGGGC
ATCGGCGACA GCCCCGACGA ACTGCGCTAT CAGGTGCGCC GCCAGCGCAA ATATGGCGCC
GAGGTCATCA AGGTGTGCGC GACCGGCGGC GTTTTTTCGC GCAACACCGA GCCGGGGCAG
TTGCAGGTGC CCGAGAATGA GCTGCGCGCC ATCGCCGACG AGGCACACCA GTGGGGGCTG
CGCGTCGCCG CGCACGCGCA TGGCGCGGCG GGCATCCGCG CCGCGATCGC GGCGGGGATC
GACACGATCG AACATGCGAG CCTCGTCGAC GACGAGGGCA TTCGCATGGC GGTCGCCCGC
AAGCAGCCCG TCTGGTTCGC GATGGATATC TACAACACCG AATATACGCA GGCCGAGGGC
TCGAAAAACG GCGTGCTTGA GGATAATCTG CGCAAGGATC GCGAGATCGC GCAGATCCAG
CGCGACAATT TCAGGAAAGC GCACCGCGCC GGGGTGCGGA TGGTGTTCGC GTCCGACGCC
GGAGTGATGC CGCACGGTGA GGTCGGCAAG CAGTTCCGCG TCATGGTCGA ATATGGAATG
ACGCCGATAC AGGCGATCCA GGCCGCGACG AAAAACGCCG CCGAGGCGCT GGGGCGCGAA
AAGGATGTAG GGGCGATTGC CGTGGGGCGC TATGCCGACA TCGTCGCGGT CGACGGCGAT
CCGCTGGCCA ATGTGCGCGA GCTGGAAAGC GTCGACGCGG TGGTGAAGGG CGGGGTGCTG
GTGAAGGGGG AGTGA
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| Protein sequence | MQSRVKLRSF LRVMRIGGIA LLGAVGTGTA AQEAPSQTVI TAARYIDVLS GKTVEHPAIF
VGADGRITNI ADARTVRWGS DVKHIDLGGK TLLPGLIDMH VHLDGPADIG GYRGLEFTDS
FWGMTAVKNA NDMLNAGFTT VRNVGSGDRN DIGLKQAIDS GYATGPRIVP AGYALGATGG
HCDSTFLPPS LEKKDGKEEG IGDSPDELRY QVRRQRKYGA EVIKVCATGG VFSRNTEPGQ
LQVPENELRA IADEAHQWGL RVAAHAHGAA GIRAAIAAGI DTIEHASLVD DEGIRMAVAR
KQPVWFAMDI YNTEYTQAEG SKNGVLEDNL RKDREIAQIQ RDNFRKAHRA GVRMVFASDA
GVMPHGEVGK QFRVMVEYGM TPIQAIQAAT KNAAEALGRE KDVGAIAVGR YADIVAVDGD
PLANVRELES VDAVVKGGVL VKGE
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