Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sala_1236 |
Symbol | |
ID | 4080307 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingopyxis alaskensis RB2256 |
Kingdom | Bacteria |
Replicon accession | NC_008048 |
Strand | + |
Start bp | 1285050 |
End bp | 1285577 |
Gene Length | 528 bp |
Protein Length | 175 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 638009596 |
Product | hypothetical protein |
Protein accession | YP_616284 |
Protein GI | 103486723 |
COG category | [S] Function unknown |
COG ID | [COG2852] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.453512 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCCCGCGA GGGGCCAAAG CCCCTCTCCC CTTGCGGGAG AGGGGTTGGG GAGTGGGGTC CGCGCCGCGG CAGCGGCGCA CAAGACTCTC TCCGAAGTTC TCGCTCGCAA AGCCCTGTTG CTGGACCGCG TCCGCCAAAT GCGATCGAAT CCCACTGATG CCGAACGGCA CCTATGGTCG ATCCTCCGTG CTGGTCGTCT CGAAGGTCTG AGATGGCGGC GTCAGGAGGT CATCGACGAC CGCTATATTG CTGATTTCCT CTGCTACGAG CATCGGTTGA TCGTCGAGGC CGATGGAGGC CAGCATGGCG ACAATCCTCA TGATGCCGAG CGCGACACCT ATCTGACCGC ACAGGGCTTT CGCATCCTGC GCTTCTGGAA CAACGACATC CTCGCCAACA GCGAAGGCCT AGTCGCGAGC ATCCTCGATG CCATCGATTC TCTTGGCGCG CAGACGCGCG CCGACCCCAC ACCCCAACCC CTCTCCCGCA AGGGGAGAGG GGCTTTTGAA GGAGCCCATA ATGGCTGA
|
Protein sequence | MPARGQSPSP LAGEGLGSGV RAAAAAHKTL SEVLARKALL LDRVRQMRSN PTDAERHLWS ILRAGRLEGL RWRRQEVIDD RYIADFLCYE HRLIVEADGG QHGDNPHDAE RDTYLTAQGF RILRFWNNDI LANSEGLVAS ILDAIDSLGA QTRADPTPQP LSRKGRGAFE GAHNG
|
| |