| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_1226 |
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| Symbol | |
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| ID | 4080450 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | + |
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| Start bp | 1270779 |
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| End bp | 1272422 |
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| Gene Length | 1644 bp |
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| Protein Length | 547 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 638009586 |
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| Product | major facilitator transporter |
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| Protein accession | YP_616274 |
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| Protein GI | 103486713 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2271] Sugar phosphate permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGATG CAGCCGCCGT CGCCGACCAT GGCGCGGTCT ATCAGCCGAC GCAGAAAGAT
ATCCGCATGG TCATCGCCGC ATCGTCGGCG GGGACGGTGT TCGAATGGTA TGATTTCTTC
ATCTACGGCA CGCTCGCGGC GATCATCGGC AAGGCCTTTT TCCCAAGCGA CAATGCGACC
CTCGAAACCC TGCTCGTCTG GGCCGGCTTT GCGGTCGGTT TTGGATTCCG CCCGCTCGGT
GCCGTCCTCT TCGGCTTCCT CGGCGACCGG CTGGGCCGCA AATATACCTT CCTCGTAACC
GTTACCCTGA TGGGCATCGC GACTGCGGGG GTCGGGATGA TCCCGTCGGC GGCGACGATC
GGCGTCGCCG CGCCAATCAT CGTCATCCTG CTGCGGATAT TGCAGGGGCT CGCGCTTGGT
GGCGAATATG GCGGCGCGGC CATCTATGTC GCCGAACATT CGCCGCCCGG AAAGCGGGGT
TTCTATACCA GCTTCATCCA GGCGAGCGTC GTCGGCGGCT TCGTGCTCAG CCTGATCGTT
GTGCTCGGGT GCAAGGCGCT GATGCCCGAT GCCGTCTGGG AAAGCTGGGG GTGGCGCGTG
CCCTTCCTCC TGTCGCTCAT CCTGCTCGGT ATTTCGCTGT GGATGCGCCT CAAACTTTCC
GAAAGCCCGG TCTTCCAGGC GATGAAGCAG GAGGGCGAAC TGGCGCGTAA TCCGCTGAAG
GAAAGCTTTA CCTATCCGGG CAATCCGCGG CGCATCTTCA TTGCGCTGTT CGGCATCGCT
GCCGGGCTCA CGGTGATCTG GTACACGGCG ATGTTCTCCG GCCTCTCCTT CCTCAAAGGC
CCGATGAAGG TCGAGGAGAC CGCCGCCGAA ATCATCGTCG GCTGCGCTGC CGCAGTCGGC
ATGGGCTTTT TCATCTGGGC AGGCCGCCTG TCGGACCGCA TCGGGCGGAA AAAGCCGATC
GTGTGGGGCT ATGGCGCCAC GCTGCTGCTG CTGTTCCCGC TTTTCTGGTG GATGGGAAGC
GTCGGCAATC CCGCGCTGGC CGCTGCGGCC GAAAGGGCGC CGGTGGTCGT CTCCGGCTCG
CAATGCAGCT TCGATCCCTT TGCGCAGAGC CAGGCGACCG CGTGCGGGCG AACGCTGGGT
GAACTGACGA AGCTTGGCGT GCCCTATACG GTGGTCGAAA CGCCGGGCGG CTTCGACAGC
GTCACCGTCC GGATCGGCGG CCGCGAGGTT GCGGGGGAGG ATCCCGCGCT GCTCCGGCCC
GCGCTCGAGG CGATGGGTTA TGACTTTGCC AAACAGGTTC CCGGCGCGGG GGGCATCGCG
ATCATCTTCC TCGCGCTGCT GGGGCTCAGC GCGCTGTCGG GTTTCACCTA TGGGCCGGTC
GCGGCCTTGC TGTCGGAAAT GTTCCCGCCA CATGTGCGTT ATTCGTCGCT GTCGATTCCC
TATCATATCG GCACCGGCTA TTTCGGGGGT TTCCTGCCGT TGATCGCCAG CTTCATCATC
GCCAAGACGG GCAATGCCTA TGCCGGGCTC TGGTATACAT GGGGCGTCGT GCTCGCGGCG
TTTCTGATCA CCGCCTTCAT GCTGAGGGAT CCGGTCGAGG GGAAGTGGGA TCGCGCCGGC
GGCGCGGCGG CGCCCACGTC CTGA
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| Protein sequence | MTDAAAVADH GAVYQPTQKD IRMVIAASSA GTVFEWYDFF IYGTLAAIIG KAFFPSDNAT
LETLLVWAGF AVGFGFRPLG AVLFGFLGDR LGRKYTFLVT VTLMGIATAG VGMIPSAATI
GVAAPIIVIL LRILQGLALG GEYGGAAIYV AEHSPPGKRG FYTSFIQASV VGGFVLSLIV
VLGCKALMPD AVWESWGWRV PFLLSLILLG ISLWMRLKLS ESPVFQAMKQ EGELARNPLK
ESFTYPGNPR RIFIALFGIA AGLTVIWYTA MFSGLSFLKG PMKVEETAAE IIVGCAAAVG
MGFFIWAGRL SDRIGRKKPI VWGYGATLLL LFPLFWWMGS VGNPALAAAA ERAPVVVSGS
QCSFDPFAQS QATACGRTLG ELTKLGVPYT VVETPGGFDS VTVRIGGREV AGEDPALLRP
ALEAMGYDFA KQVPGAGGIA IIFLALLGLS ALSGFTYGPV AALLSEMFPP HVRYSSLSIP
YHIGTGYFGG FLPLIASFII AKTGNAYAGL WYTWGVVLAA FLITAFMLRD PVEGKWDRAG
GAAAPTS
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