| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_1221 |
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| Symbol | |
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| ID | 4080445 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | + |
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| Start bp | 1263607 |
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| End bp | 1265754 |
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| Gene Length | 2148 bp |
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| Protein Length | 715 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 638009581 |
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| Product | methylmalonyl-CoA mutase |
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| Protein accession | YP_616269 |
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| Protein GI | 103486708 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1884] Methylmalonyl-CoA mutase, N-terminal domain/subunit
[COG2185] Methylmalonyl-CoA mutase, C-terminal domain/subunit (cobalamin-binding) |
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| TIGRFAM ID | [TIGR00640] methylmalonyl-CoA mutase C-terminal domain
[TIGR00641] methylmalonyl-CoA mutase N-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.584735 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGACA AACCAACCAT CGCCGACTGG CAGGCCGCCG CCGAGAAGGA AGTGAAGGGC
AAGGACCTCA CCTGGCACAC GCCCGAGGGG ATCGACGTCA AGCCGCTCTA TACGGCCGAG
GACGTGCGCG AAGACCCCGG CCTGCCCGGC TTCGCGCCCT TCACGCGCGG GGTGCGCGCG
TCGATGTATG CGGGGCGGCC GTGGACGATC CGGCAATATG CGGGGTTTTC GACCGCCGAG
GAATCGAACG CCTTTTACCG CCGCAACCTC GCGGCGGGGC AGAAGGGGCT GTCGGTCGCC
TTCGACCTCG CCACCCACCG CGGCTATGAC AGCGACCATC CGCGCGTCGT CGGCGACGTC
GGCAAGGCGG GGGTCGCGAT CGACACGGTC GAGGACATGA AGATCCTGTT CGACGGCATC
CCGCTCGATC AGATGTCGGT CAGCATGACG ATGAACGGGG CGGTGATCCC CATACTCGCC
TTCTTCATCG TTGCGGGCGA GGAGCAGGGG GTCGATCGCA AATTGCTCGA CGGGACGATC
CAGAACGACA TTCTGAAGGA GTTCATGGTC CGCAACACCT ACATCTACCC GCCCGAACCG
AGCATGCGGA TCATCTCGGA CATTTTCGGC TACACCAGCC GCGAGATGCC GAAGTTCAAC
AGCATCTCGA TCTCCGGCTA TCATATGCAG GAAGCCGGCG CGACGCAGGT GCAGGAGCTG
GCCTTCACCA TTGCCGACGG CGCCGAATAT GTGCGCTACG GCGTCGCGTC GGGGCTCGAC
ATCGACAAGT TTGCGGGGCG CCTGTCCTTC TTCTTCGCGA TCGGCATGAA CTTTTTCATG
GAGATCGCCA AGCTGCGCGC AGCGCGCGTG CTGTGGCACC GGGTGATGAC CAACCTCGGC
GCCAAGGACG AGCGCAGCAA GATGCTGCGC ACCCACTGCC AGACGTCGGG CGTGTCGCTG
ACCGAGCAGG ACCCCTATAA CAATGTCATC CGGACGACGA TCGAGGCGAT GGCGGCGATG
CTCGGCGGGA CGCAGAGCCT GCACACCAAC GCGCTCGACG AAGCGATCGC GCTGCCGACC
GATTTTTCGG CACGCATCGC GCGCAATACG CAGATCGTCA TCCAGGAAGA AACGGGGATG
ACCAAGGTCG TCGATCCGCT TGGCGGCTCC TACTATGTCG AAGCGCTGAC ACAGGAACTG
GTCGACAAGG CGTGGGAGAT CATCGAGCGC GTCGAGAGGG AGGGCGGCAT GGCCAAAGCC
GTCGCCGCCG GCTGGCCCAA GGCGATGATC GAGGAAGCCG CCGCCGCCCG GCAGGCGCGC
GTCGACCGCG GCGAAGACGT GATCGTCGGC GTGAACAAAT ATCGCCTCAA GGACGAGGAT
CTGCTCGAAA CGCTGGAGGT CGACAACACC AAGGTCCGCG AAGCGCAGGT CGCGCGGATC
AATCGCGTGA AGGCGAGCCG TGACGAGGCG GCGTGCCGGG CGGCGCTCGA TGCGCTGCGG
AGGGCGGCGG CGGCACCGCA ATCGATCGAA ACGAACCTGC TGGCGCACGC CGTTGAAGCC
GCGCGTGCGC GTGCGACGCT GGGAGAAATC TCGTCGGCGA TGGAGGAAAG CTTCCAGCGT
TACGCCACCC AGCCGACCCC GGTGAAGGGC GTCTATGCCG CGCCTTATGC GGGCGACGAC
CGCTGGCAAC AGGTGCTCGA CGGGGTGAAG GCGGTCGAAC GCCGGATGGG CCGCAAACCG
AAGCTGCTCG TCGCCAAGAT GGGGCAGGAC GGGCACGACC GCGGCGCCAA TGTCATCGCC
TCGGCGTTCG GCGACATGGG CTTTGACGTC GTGTCGGGAC CGCTGTTCCA GACGCCCGAA
GAGACGGTGG TGCTGGCGCT CGAAAACGAG GTCGATGTCG TCGGCGCATC GAGCCTCGCG
GCGGGTCACA AGACGCTTAT CCCCGAACTT ATCCACAAGC TGAAAGAAGC GGGGCGCGGC
GACATCAAGG TGATCGCGGG CGGGGTGATC CCGCCGCAGG ATTATCAATA TCTGCGCGAC
GCGGGGGTGC AGGGGATTTA CGGCCCCGGC TCGAACGTCG TGGAATGCGC GGCCGATGTG
CTGCGCTTGC TGGGGCATAA TATGCCGCCG ATTGGAGAAG CTGCGTGA
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| Protein sequence | MSDKPTIADW QAAAEKEVKG KDLTWHTPEG IDVKPLYTAE DVREDPGLPG FAPFTRGVRA
SMYAGRPWTI RQYAGFSTAE ESNAFYRRNL AAGQKGLSVA FDLATHRGYD SDHPRVVGDV
GKAGVAIDTV EDMKILFDGI PLDQMSVSMT MNGAVIPILA FFIVAGEEQG VDRKLLDGTI
QNDILKEFMV RNTYIYPPEP SMRIISDIFG YTSREMPKFN SISISGYHMQ EAGATQVQEL
AFTIADGAEY VRYGVASGLD IDKFAGRLSF FFAIGMNFFM EIAKLRAARV LWHRVMTNLG
AKDERSKMLR THCQTSGVSL TEQDPYNNVI RTTIEAMAAM LGGTQSLHTN ALDEAIALPT
DFSARIARNT QIVIQEETGM TKVVDPLGGS YYVEALTQEL VDKAWEIIER VEREGGMAKA
VAAGWPKAMI EEAAAARQAR VDRGEDVIVG VNKYRLKDED LLETLEVDNT KVREAQVARI
NRVKASRDEA ACRAALDALR RAAAAPQSIE TNLLAHAVEA ARARATLGEI SSAMEESFQR
YATQPTPVKG VYAAPYAGDD RWQQVLDGVK AVERRMGRKP KLLVAKMGQD GHDRGANVIA
SAFGDMGFDV VSGPLFQTPE ETVVLALENE VDVVGASSLA AGHKTLIPEL IHKLKEAGRG
DIKVIAGGVI PPQDYQYLRD AGVQGIYGPG SNVVECAADV LRLLGHNMPP IGEAA
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