| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_1217 |
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| Symbol | |
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| ID | 4080441 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | - |
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| Start bp | 1259412 |
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| End bp | 1260899 |
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| Gene Length | 1488 bp |
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| Protein Length | 495 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 638009578 |
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| Product | XRE family transcriptional regulator |
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| Protein accession | YP_616266 |
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| Protein GI | 103486705 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3800] Predicted transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.778431 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGCCCGGAT ACAGGCCGAG AGGCAAATGC GAATTTGCAA AGTTGCAAAG CGATGCTTTG
CAAACTATGC TGCCACCGAT GGTTCAAAAC CGACTCTACG CCGGGCGGCA ACTTCGCCAA
CTTCGGGAAG CCCGCAACCT CCGCCAGTCC GACTTCGCCG CCCAGCTCGG CATCTCGGCC
TCCTACCTCA GCCAGATCGA GCATGACGAC CGCCCGCTGA CCCCCGCCCT TCTCGACCGG
CTGCAAAAGC TGTTCCCGCT CGAATGGGAA GAAGTCGCCG CCGACGCCGG CGACCGCCGC
GCGGCAGCGC TCCGCGAAGC CGCCGCCGAT CCGCTGTTCG CCGCAGCGCC CCTGCCCCCC
GAGCAGATCG AACGCGCGGC GCTGCAACAA CCGCAGTTCG CCGACCAGTT CGTTGCGCTC
CACGCCGCCT ATCGCCGTGC GGGGCAGCGG CTTCAGATCA TCGACGAGGC GCTGACCGGC
GGCATCGCCG AAGGCAGCCG CCTGCCGTGG GAAGAAGTGC GCGACTGGTT CCACGACGCG
GGCAATTATG TCGACAGCAT CGACCGCGCG GCAGAGGCAT TGGCGGAGCA ATTGCGCGGC
AAAGCCCCCT CCCCCGCGAT CGAGACGATC GAACGCCGGC TGCGCGATGC GCTCGGCATC
TCGATCGTCT ATCAGCAAAC CCAAGCCTTG CGCGATTTCG ACGCGACGAT GCGCCATTTG
GTGATCGACC CGTCACAGCC TGCCGAAAGC CGCCGATTTC AGCTCGCGCA CCAGCTTGCC
GCACTGGCGC TGGCGCGCGA GATCGCGGCG GTGGTCGAAG CGTCGCCGCT TCGCACCGCG
GCGGCGCGGC AACTGCTCCA CGTCGGCCTC GCCAACTATG CCGCGGGCGC CGTCCTCATG
CCCTATGCCC CCTTTCGCGC CAGCGCGCGG GCGGTGCGCC ACGACATCGA CCGGCTGCGG
CTCGAATATG GCGTGAGTTT CGAGCAGGCG TGCCACCGCC TCTCGACGCT CCAGCGCCCC
GGCGCGCGCG GCATTCCCAT GTTCTTCTGC CGCGTCGACA TGGCGGGCAA CATCACCAAG
CGCCACAGCG CGACGCGGTT GCAATTCGCG CGTTTCGGCG GCGCCTGTCC CTTGTGGATC
GTCCATGAGG CGGTCGCGAT CCCCGATCGC ATCCTGTTCC AGCTCGCCGA GACGCCCGAC
GGCCTGCGCT ATGTGTCGAT GGCAAAGGGC TTGGTGAAGC CGTCGGGAAG CTATGCCCGC
GCGCCTCGTC GCTACGCGGT CGCACTGGGG TGCGAGGCGC AATATGCAGG CGACTTTGTC
TATGCCGACG GAGTCGATGT CGCCGCGCCC CAGGCCGCGA CGCGCATCGG CCTGTCGTGC
CGCATCTGCC CGCGCGACGA TTGCGACCAG CGCGCCTTCC CGCCAAGCGA CCGGCCGATT
TTGGTCGATC CCGATCGGCG CGATGTGGTG CCGTACCGGA TTGGATGA
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| Protein sequence | MPGYRPRGKC EFAKLQSDAL QTMLPPMVQN RLYAGRQLRQ LREARNLRQS DFAAQLGISA
SYLSQIEHDD RPLTPALLDR LQKLFPLEWE EVAADAGDRR AAALREAAAD PLFAAAPLPP
EQIERAALQQ PQFADQFVAL HAAYRRAGQR LQIIDEALTG GIAEGSRLPW EEVRDWFHDA
GNYVDSIDRA AEALAEQLRG KAPSPAIETI ERRLRDALGI SIVYQQTQAL RDFDATMRHL
VIDPSQPAES RRFQLAHQLA ALALAREIAA VVEASPLRTA AARQLLHVGL ANYAAGAVLM
PYAPFRASAR AVRHDIDRLR LEYGVSFEQA CHRLSTLQRP GARGIPMFFC RVDMAGNITK
RHSATRLQFA RFGGACPLWI VHEAVAIPDR ILFQLAETPD GLRYVSMAKG LVKPSGSYAR
APRRYAVALG CEAQYAGDFV YADGVDVAAP QAATRIGLSC RICPRDDCDQ RAFPPSDRPI
LVDPDRRDVV PYRIG
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