| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_1189 |
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| Symbol | |
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| ID | 4080837 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | + |
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| Start bp | 1229244 |
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| End bp | 1231103 |
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| Gene Length | 1860 bp |
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| Protein Length | 619 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 638009550 |
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| Product | dihydroxy-acid dehydratase |
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| Protein accession | YP_616238 |
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| Protein GI | 103486677 |
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| COG category | [E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism |
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| COG ID | [COG0129] Dihydroxyacid dehydratase/phosphogluconate dehydratase |
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| TIGRFAM ID | [TIGR00110] dihydroxy-acid dehydratase |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTTCTT ATCGTTCGCG CACCACAACC CATGGCCGCA ACATGGCCGG TGCCCGCGGC
CTGTGGCGTG CGACGGGGAT GAAGGACAGC GACTTCGGCA AGCCCATCAT CGCGGTGGTC
AACAGCTTCA CCCAGTTTGT GCCGGGCCAT GTTCACCTGA AAGACCTGGG CCAGATGGTC
GCGCGCGAGA TCGAGGCAGC CGGAGGCGTT GCCAAGGAGT TCAACACGAT CGCGGTCGAT
GACGGCATCG CGATGGGACA CGACGGGATG CTCTATTCGC TGCCCAGCCG CGACCTGATC
GCCGACAGTG TCGAGTATAT GGTCAATGCG CATTGCGCCG ATGCGATGGT GTGCATTTCC
AACTGCGACA AGATCACGCC GGGGATGTTG ATGGCGGCGC TGCGCATCAA CATCCCCGTG
GTGTTCGTGT CGGGCGGGCC GATGGAGGCG GGCAAGGTCG TGCTGAAGGG CAAGGAGGTC
GCGCTCGACC TGGTCGACGC GATGGTCGCC GCCGCCGACG AAAAATACAG CGACGAAGAA
GTGCTGGCAA TCGAACAGGC GGCGTGCCCG ACATGCGGAT CATGTTCGGG CATGTTCACC
GCCAATTCGA TGAACTGCCT GACCGAAGCG TTGGGGCTGT CGCTGCCGGG CAATGGCTCG
ACGCTGGCGA CCCACGCCGA CCGCAAGGAG CTGTTCCTGC GCGCCGGGCG GATCGTCGTC
GAAATGTGTC GCCGTCATTA TGAGGAAGGC GACGACAGCG TCCTGCCGCG CAATATCGCG
ACGTTCGAGG CGTTTGAAAA TGCGATGAGC CTCGACATCG CGATGGGCGG ATCGACCAAC
ACCGTGCTCC ACCTGCTCGC CGCCGCGCAT GAAGCGGGCG TCGATTTCAC GATGGAAGAC
ATCGACCGGC TGTCGCGTCG CGTGCCGTGC CTGTCAAAGG TCGCGCCGGC CAAGAGCGAC
GTGCATATGG AGGATGTCCA CCGCGCGGGC GGGATCATGG CGATCCTCGG CGAACTCGAC
CGCGCGGGGC TGCTCCACGC GCATCTGCCG ACGGTGCATA GCGCCACGCT GGGCGATGCG
CTCAACAAAT GGGACATTGC GCGCACGAAC GACCCGGAGG TGCAGAAGTT CTTCATGGCC
GCCCCCGGCG GCGTGCCGAC GCAGACGGCG TTCAGCCAGG CCCGGCGCTG GGACAGCCTT
GACCTCGACC GGATAAGCGG TGTGATCCGT TCGGCGGACC ATGCGTTCAG CAAGGACGGC
GGGCTGGCGG TGCTGAGCGG CAATGTCGCG CCCGACGGCT GCATCGTGAA GACCGCGGGG
GTCGATGAAA GCATCCTCAA GTTCAGCGGG CCGGCGAAGG TGTTCGAGAG CCAGGACGCC
GCGGTTGCGG GCATATTGAC CGGGCAGGTC GAGGCGGGCG ACGTCGTCGT CATCCGCTAC
GAAGGGCCGA AGGGCGGGCC GGGGATGCAG GAAATGCTCT ATCCGACCAG CTATCTGAAA
TCGAAAGGGC TGGGCGCCGC CTGTGCGCTC GTCACCGATG GGCGCTTTTC GGGCGGCACG
TCGGGCCTGT CGATCGGCCA TGTCTCGCCC GAGGCGGCCG AAGGCGGGAC GATCGGGCTG
GTCGAGAATG GCGACCTCAT CAACATCGAC ATTCCGTCGC GGACGATCAC GCTCGCGGTG
GCCGACAGCG TGCTCGCCGA ACGCCGCGCC GCGATGGAGG CGAAGGGTGA CGCCGCCTGG
CAGCCCGCCA AGCCGCGCCC GCGCAAGGTT TCGGTGGCGC TTCAGGCCTA TGCCGCGATG
ACGACGAGCG CCGCGCGCGG CGCGGTGCGC GACCTGTCGC AGCTGAAGGG CAAGGGATGA
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| Protein sequence | MPSYRSRTTT HGRNMAGARG LWRATGMKDS DFGKPIIAVV NSFTQFVPGH VHLKDLGQMV
AREIEAAGGV AKEFNTIAVD DGIAMGHDGM LYSLPSRDLI ADSVEYMVNA HCADAMVCIS
NCDKITPGML MAALRINIPV VFVSGGPMEA GKVVLKGKEV ALDLVDAMVA AADEKYSDEE
VLAIEQAACP TCGSCSGMFT ANSMNCLTEA LGLSLPGNGS TLATHADRKE LFLRAGRIVV
EMCRRHYEEG DDSVLPRNIA TFEAFENAMS LDIAMGGSTN TVLHLLAAAH EAGVDFTMED
IDRLSRRVPC LSKVAPAKSD VHMEDVHRAG GIMAILGELD RAGLLHAHLP TVHSATLGDA
LNKWDIARTN DPEVQKFFMA APGGVPTQTA FSQARRWDSL DLDRISGVIR SADHAFSKDG
GLAVLSGNVA PDGCIVKTAG VDESILKFSG PAKVFESQDA AVAGILTGQV EAGDVVVIRY
EGPKGGPGMQ EMLYPTSYLK SKGLGAACAL VTDGRFSGGT SGLSIGHVSP EAAEGGTIGL
VENGDLINID IPSRTITLAV ADSVLAERRA AMEAKGDAAW QPAKPRPRKV SVALQAYAAM
TTSAARGAVR DLSQLKGKG
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