| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_1165 |
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| Symbol | |
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| ID | 4080871 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | - |
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| Start bp | 1199164 |
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| End bp | 1199889 |
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| Gene Length | 726 bp |
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| Protein Length | 241 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 638009526 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_616214 |
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| Protein GI | 103486653 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.210939 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.103918 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATAGGCG TGGCGCCCAT GACGGACCCG GAATCGGCGG TGGTGATCGG CGCAGCGGGC
GGCATCGGCG CGGCCTTGGC CGATGCTCTT GCGGCCGATG GTCGCCATGA CGTCATCCAC
CGCCTTGCGC GGTCGGCGCC GGCCCCGTTT GCAATCGACA TTACCGACGC GGATTCGGTG
GCCGCGGCGG CGGCGATGGT CGCCGCCGGT GGCCCGCCGC CCCGGCTGGT CATCGTCGCG
ACGGGCTTGC TCCACGCCGA CGGCCATCGG CCCGAACGCG GCCTGTCCGA CATCGATCCC
GACTGGATGG CGCGAAGTTT CGCCGTCAAT ACGATCGGGC CCGCGCTGGT CGCCAGGCAT
TTCCTGCCGC TGTTGCCGCG CCGCGGGCGC ACGATTTTCA CTGCGTTGTC GGCACGGGTC
GGCAGCATCG CCGACAACCG CACCGGCGGC TGGTTCAGTT ATCGCGCGTC GAAAGCCGCG
CTCAATCAGC TCGTCCGCAG CTTCGCCATC GCCGAGACGC GCCGCAATCC AGAGGCGGTG
GTCGTCGCCT TGCATCCCGG CACGGTCGAT ACGGCGATGT CGCGGCCGTT TCAGCGCGCG
GTAGCGCCGG GGACGCTCGT GACGCCGCCC ATCGCTGCGG CCAATCTGCT GCGCACGATC
GATGCGCTGA CGCCTGCCCA AACGGGCCGG ATTTTCGCGT GGGACGGCAG CGAAATCATT
CCCTGA
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| Protein sequence | MIGVAPMTDP ESAVVIGAAG GIGAALADAL AADGRHDVIH RLARSAPAPF AIDITDADSV
AAAAAMVAAG GPPPRLVIVA TGLLHADGHR PERGLSDIDP DWMARSFAVN TIGPALVARH
FLPLLPRRGR TIFTALSARV GSIADNRTGG WFSYRASKAA LNQLVRSFAI AETRRNPEAV
VVALHPGTVD TAMSRPFQRA VAPGTLVTPP IAAANLLRTI DALTPAQTGR IFAWDGSEII
P
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