| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_1142 |
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| Symbol | |
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| ID | 4080887 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | + |
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| Start bp | 1179807 |
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| End bp | 1180400 |
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| Gene Length | 594 bp |
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| Protein Length | 197 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 638009503 |
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| Product | putative transcriptional regulator |
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| Protein accession | YP_616191 |
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| Protein GI | 103486630 |
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| COG category | [K] Transcription |
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| COG ID | [COG1386] Predicted transcriptional regulator containing the HTH domain |
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| TIGRFAM ID | [TIGR00281] segregation and condensation protein B |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.463522 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCGACG ATCTGGAGCG CGCGATCGAA GCGATGCTCT TTGCCAGCGA CGAGCCGCTC
GACGCGCGGC AGCTTGCCGC CCGCCTGGGC GATGACATGG CGCCGGGACA GGTGCGGGCG
GTGATTGAGG CGATTGCGGC GCGCCATGCC GGGAGCGGCA TCGAACTCGT CGAACGCGGC
GGGCGCTGGC ATTTCCAGAC CCCCGCCGAT CTGGCGCATC TGCTTCGCCG CGAACGCGAC
GACCCGCGCA AACTGTCGCG CGCCGCCGCC GAAGTGCTGG CGATCGTCGC CTACCACGAA
CCCGTCAGCC GCGCCGAGAT CGAGGCGATC CGCGGCGTCC AGACGTCGAA GGGTACGCTC
GACGTGCTGA TGGAAGCCGA ATGGATCGCG CCCGCGGGGC GTCGCGAAGT GCCGGGACGC
CCGCTCATCT ACAAGACCAC CGATACCTTC CTGCAGCATT TCGGCCTTAG CAGCCGCAAG
GATCTGCCCG GGATCGACGA CCTGCGCGCG GCGGGGCTGC TCGATCCGGT CGATCTCGCT
TTTGAAGCGG CGATGGGCGA GCTGGACCTA GTAAAAGACG GCGAAGAGGC TTAG
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| Protein sequence | MIDDLERAIE AMLFASDEPL DARQLAARLG DDMAPGQVRA VIEAIAARHA GSGIELVERG
GRWHFQTPAD LAHLLRRERD DPRKLSRAAA EVLAIVAYHE PVSRAEIEAI RGVQTSKGTL
DVLMEAEWIA PAGRREVPGR PLIYKTTDTF LQHFGLSSRK DLPGIDDLRA AGLLDPVDLA
FEAAMGELDL VKDGEEA
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