| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_1115 |
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| Symbol | |
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| ID | 4082053 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | - |
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| Start bp | 1150702 |
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| End bp | 1151547 |
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| Gene Length | 846 bp |
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| Protein Length | 281 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 638009476 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_616164 |
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| Protein GI | 103486603 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1177] ABC-type spermidine/putrescine transport system, permease component II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.360283 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGATGGCGC TCTTCGCCCG CACCCCGCGC GCACCGCTCG AATATAGCCG GACGCTGTGG
ATGCGCCTGT GGGTCGGCGC GGTGATGGTC TTTCTCTACG CGCCGCTGGT GGTGCTGATG
ATCTTCAGCT TCAACGACAG CAAGCGCAAC GTCGTATGGC GCGGCTTCAC GACGAAATAT
TATGAGAAGG CACTGGGCAA CGACCAGCTG GTCGAGGCGC TGGTCAATTC GCTGACCATC
GCCGCGCTGG CGACGCTCGC CAGCCTCGTG CTTGGCACGC TCGCCGCGGT GATGCTCTGG
CGCTTTCGTT TCCCGTGGAA GGGCGCGATC GACGGCACCA TCTCGTTGCC GATCATCGTT
CCCGAAATCT GCCTCGGCGT AGCGTTCCTG ATGTTTTTCG CGGCAATCGG CTGGCCGAAC
GACCTCGTCT GGCCGTTCAA CCTCGGCGCG ATCACCATCG CGCACATCAC CTTCTGCTTC
CCCTTCGTCA CCATGGTCGT GCGCTCGCGC CTCGCAAGCT TCAACCGCGA GCAGGAGGAA
GCCGCGAAGG ATCTGGGCGC CAGCGAATGG CAGGTGTTCC GCGACGTGCT GATTCCGCAC
ATGAAACCGG CGCTCGTCGC GGGTGCGTTG CTATCATTCA CCCTCAGCCT CGACGATTTC
GTCATCACCT ATTTCACCAG CGGCCCCGAC ACGATCACTT TCCCGGTGAA GGTCTATTCG
ATGGTCCGCT TCTCGGTGAC GCCAGAGGTC AACGCGGCAT CGACCCTGCT CATCATCCTT
ACCGTCGTCC TGACCTTCGT TGCGCTGAAG GCGCAGGGTG TGAAAGCCAT TGCGGAAACC
CACTGA
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| Protein sequence | MMALFARTPR APLEYSRTLW MRLWVGAVMV FLYAPLVVLM IFSFNDSKRN VVWRGFTTKY
YEKALGNDQL VEALVNSLTI AALATLASLV LGTLAAVMLW RFRFPWKGAI DGTISLPIIV
PEICLGVAFL MFFAAIGWPN DLVWPFNLGA ITIAHITFCF PFVTMVVRSR LASFNREQEE
AAKDLGASEW QVFRDVLIPH MKPALVAGAL LSFTLSLDDF VITYFTSGPD TITFPVKVYS
MVRFSVTPEV NAASTLLIIL TVVLTFVALK AQGVKAIAET H
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