Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sala_1111 |
Symbol | |
ID | 4082049 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingopyxis alaskensis RB2256 |
Kingdom | Bacteria |
Replicon accession | NC_008048 |
Strand | + |
Start bp | 1146120 |
End bp | 1146860 |
Gene Length | 741 bp |
Protein Length | 246 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 638009473 |
Product | peptidase C26 |
Protein accession | YP_616161 |
Protein GI | 103486600 |
COG category | [R] General function prediction only |
COG ID | [COG2071] Predicted glutamine amidotransferases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.517876 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCGCGC GCCCCGTTCT TGGCATCATC GCCTGCAACC GCACCATCGG CGTCGAAACC GCGCAGGCAG TGATGAACCG CTATGCGACC GCGGCGATGC GTCATGCCGA TTGCGCCGCG CTCATCATCC CGTCGCTCCC CGATCTGATG CGCGCCGACG AAGTGGTCGG GCGGCTCGAC GGCGTGCTTC TGACGGGGAC GCCATCGAAT GTCGAACCGG CGCGCTACGG CGATGCCGCG ACAGGTGAAG GGCCCTTCGA TCCCGATCGT GACCGGATGA TGATCGAACT GGTCGCGGCG GTGATCGCGG CGCAGCGGCC GCTGTTCGGC ATCTGTCGCG GCTTTCAGGA GATCAACGTC GCACTGGGCG GCACGCTGCG CCGCGATACG GCGGCGAACG ACGAACTGCT GCGCCACCAT GCACCGGAGG GCGTTTCGTT CGACGCGATG TTCGACCATC GGCACCGGGT CGATCTGGTC GCGGGCGGGC TGCTCGCGTC GGCCTATGAA ATGCCGTCGC TGGAGGTGAA CTCGGTCCAT TTCCAGGGAA TCGGAGCCCT CGCCGACGGG CTGACGGTCG AGGCGCGCGC GCCCGACGGG CTGGTCGAAG CCTATAGCGC GCGACCCAAT GGTGCGCCAC TGCTCGCGGT GCAGTGGCAT CCCGAATGGG CGACCGACGC CGATACGCGG AGCCAGACCT ATTTTCACCT GCTCGGCCGC GCGCTAAGAG GCGAATTATG A
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Protein sequence | MSARPVLGII ACNRTIGVET AQAVMNRYAT AAMRHADCAA LIIPSLPDLM RADEVVGRLD GVLLTGTPSN VEPARYGDAA TGEGPFDPDR DRMMIELVAA VIAAQRPLFG ICRGFQEINV ALGGTLRRDT AANDELLRHH APEGVSFDAM FDHRHRVDLV AGGLLASAYE MPSLEVNSVH FQGIGALADG LTVEARAPDG LVEAYSARPN GAPLLAVQWH PEWATDADTR SQTYFHLLGR ALRGEL
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