| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_1109 |
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| Symbol | |
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| ID | 4082047 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | - |
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| Start bp | 1141695 |
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| End bp | 1144910 |
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| Gene Length | 3216 bp |
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| Protein Length | 1071 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 638009471 |
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| Product | autotransporter beta-domain-containing protein |
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| Protein accession | YP_616159 |
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| Protein GI | 103486598 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCAAGA CCCTGCTGGC CTCGACCTGC CTGGCCACCC TTCTCTCGAC CGCTGTTCAT
GCCGAAACGA CGATCAGCAC TGCCACGACC GCGCCTGTGC GGACGTCGAC AATCAAGTCG
GGCGCGCCCG ACGACATCAA GATCACCTCC GCCGGGTCGA TCAAGCCGAC CGTCGCAGGA
CCCGCAGTCA CGATCGACAG CAATCACAAG GTCGTCAACG ACGGCACGAT CGAGTTCAGC
AATATCGATG GCGCAACAGG CATTCTTGCC GGCGCAGGGA CCACGGGCGG CATCACCAAC
AGCGCGTCCG GCAAGATCAC GATCGGCGAA ACCTACGCCG CGACCGACAT CGACAATGAC
GGCGACCTCG ACGGCCCGTT CGCGATCGGC ACAGGCCGCG TCGGCATCGC GACCGCTGGC
GCGTTTTCGG GCAACATCGT CAATTCGGGT GCGATCGCGA TCGAAGGCAA TGATTCGGCG
GGCATAAGGC TCGGCGGCCC GCTGACGGGC AATTTCACCA ACGATGGCAC GATCAGCGTG
CTCGGCGACA GGGCGCTCGG CGTCGGGCTT CAGGACGTCA CGGGCAATAT CCGTCTTGCC
GGAACGATTG CCGCCACCGG TGTCGATGCG ATCGCCGCGC GGCTCGGCGG CGACATCACG
GGCGCGCTCG TCGTGCAGGG CAATCTCACG GCAACGGGCT ATCGCTTCAC CGCGCCCCCG
GCCGACCCCT CGAAGCTCGA TGCCGACGAC CTGCTGATCG GCGGTCCCGC GCTGGCGGTC
GAAGGCGATG TGACGGGCGG CATCATTTTC GCGGTCCCTC CGAAGGATTC GAGCACAACC
GACAAGGATG AGGACGATGA CGGCATCGAC GACGACAAGG AAGGGTCGGC GGTCGTCCGC
TCCTTTGGAT CGGCGGCGGC CATCCGGATC GGTTCGGCCG ACCGCGATGT CGCGATCGGC
GCGCTCGCGG GCACCGGAAC CGGCCTCGGC GTCATCATCG ACGGCTCGGT GCTCGGCAAC
GGGCTTTACG CCGGCAAGGA TGGCAATGCG ATCCGGATCG GCGGGCTTGG CGGCGCCGTG
ACGATCGCTG GCGGCATCGG CATCGGCGCC ACCGGCAGCG TTGGGGCGCA GTCCAAAGAT
GCGGCGGCGA CGGCAATCCG CTTCGGCAGC GGTGCCTCGA CCCCCGAACT GCGTAACGCG
GGCAAGGTCG AGGCGTCAAC CGGCGGCAAT GCGTCGGGGG CAGTAGCGAC CGCGGTGATC
GTGGAAGCGG GCGCCGACGT CGCGCTGATC CGCAACAGCG GCACGATCGC GGCCAAGACC
GGCGGCGACA ATGGCACGGC GCGCGCGATC GTCGACCTGT CGGGCAATGT CGATATGGTC
GAGAATAGCG GCGCGATCAG CGCGAGCGGC GCGCTCGTTT CGTCGGATCG CAACATCGCG
ATCGACCTGT CGGCCAACAA CAATGGGGCA ACGATCAAGC AGACCGCCGT GGCCGCGGGT
ATCACCGCGC CGAGCATCGT CGGCGACATC CGTTTCGGCG GCGGCAACGA CGTGTTCGAC
ATCGCGGATG GTTCGGTGAA GGGCAACAGC ATCTTCGGCG CCGGCAACAA CAGGCTCGCG
CTGTCGGGCG ACGCGACCTA TGCCGGCAAC GCCCGCTTCG GCGCCGGCAA CGACACGATG
GCGCTGGCCG GAACCTCCAA GTTCACCGGG CTCGCCGACT TCGGCGGCGG CGCCGATGCG
CTAACGATCG GCGGCACTTC GGTCTTTACA GGCACTCTTG CCAATTCGTC GGGACTGGCC
GTGTCGGTCA ATGGTGGCAC CTTCGACGTG CGGGGCGCCG CGACGATCGC ATCGCTTGCC
GTAACCGACA AGGGCGTCCT TGGCGTCATG CTCGACACAG GCAGCACGGG CACCGCGCTG
CAAGTGACGG GGAATGCCAG CTTCGGCGCG GAATCGAAGC TCGCGCTTCA ATTGTCGAGC
ATCGAAGAGG CCGAGGGCGA GCACGTCGTG CTCACCGCCG GATCGATCAC TGGCGCCAAC
AATCTGACCG CCTCGCAGAC ACTTCTTCCC TTTCTTTACA AGGGCACACT CACCTCGACT
GCCACCCGGC TGATCGTCGA TGTCGCGCGC AAGAGCACGA GCGAGCTCGG TCTCAACCGC
TCGGAAGCCG GCGCTTTCGA CGCTGTGCTC GATGCCGTCG TCGCCGAACA GAAGATCGAG
GACGTGTTCC TCGGCATCAC CGATGGCGAT CAGTTCCGCA GCCAGCTTCA GCAGATGCTG
CCGGAACACG AAGGCGGAGT CTTTGAAACC GTCACCTCGG GCTCGCGCGC GCTCGCACGC
CACCTCCTCG ACCCCAATGC GCCGTATCAG GACGAAGGCA AATGGGGCTA TTGGGTGAAC
CAGGCCGTCT GGGGCACGTC GAAGGGAATC GGCAACACCG CGAGCTATGA CGTCAGCGGC
TGGGGCATCT CGCTCGGCGC GGAGATCGAG AGCGACGTCG GCAATTTCGG CGGCTCGATC
GCCTTCCTCA GCGGCAAGGA CAGCAACGGC AGCAACGCCA ATGAAGTCAG CACGAGCCAG
TTCGAAGGTG CGCTGCACTG GCGCCTGCGC TCGGACGGTT TCATGGCCAA CGCCCGCGTG
TCGGGCGCGC CGGTAAAGCT GAAGGGCACA CGCATCTTCC GCGCCGAAGC GGGCGCCGAG
GACATTGAAG AGACGATGAA GGGCAAATGG GACGCGACCC TGTGGTCGGC GTCGGGCTCG
GTTGCCTATG ACACGCGCCT CGGCGGGCTG ACGCTGCGTC CGATGGTCGC GGTGGATTAT
TACAAGCTCC AGGAAGACGG TTATCAGGAA ACGGGCGGCG GCGATGCGCT CGACCTCACC
GTGCTCGATC GCGACAGCGA CGAACTCGCG GTAACGGGCA CGGTAACGCT CGGCCTCGAG
TTCGGCGGCG CCGACGAATA TGACGGCTGG ACGCGCTTCG AACTCGAAGG CGGGCGCCGG
CAGATCGTCA GCGGCACGCT GGGCGCGACG ACGGCTTCGT TCAAGGACGG CACGCCCTTC
ACCCTGATCC CCGATGATCG CACGAGCGGC TGGGTCGGCC GCCTCCGCGG CATCGCCGGC
AATTCGGCCT TTCAGGTCGC CGGCGAAGTG TCCGCGGAAG AACAGCAAAG CCATGTCGGC
TGGGCGTTCC GTGCGAGCCT GCGGGTCGGT CTCTAG
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| Protein sequence | MRKTLLASTC LATLLSTAVH AETTISTATT APVRTSTIKS GAPDDIKITS AGSIKPTVAG
PAVTIDSNHK VVNDGTIEFS NIDGATGILA GAGTTGGITN SASGKITIGE TYAATDIDND
GDLDGPFAIG TGRVGIATAG AFSGNIVNSG AIAIEGNDSA GIRLGGPLTG NFTNDGTISV
LGDRALGVGL QDVTGNIRLA GTIAATGVDA IAARLGGDIT GALVVQGNLT ATGYRFTAPP
ADPSKLDADD LLIGGPALAV EGDVTGGIIF AVPPKDSSTT DKDEDDDGID DDKEGSAVVR
SFGSAAAIRI GSADRDVAIG ALAGTGTGLG VIIDGSVLGN GLYAGKDGNA IRIGGLGGAV
TIAGGIGIGA TGSVGAQSKD AAATAIRFGS GASTPELRNA GKVEASTGGN ASGAVATAVI
VEAGADVALI RNSGTIAAKT GGDNGTARAI VDLSGNVDMV ENSGAISASG ALVSSDRNIA
IDLSANNNGA TIKQTAVAAG ITAPSIVGDI RFGGGNDVFD IADGSVKGNS IFGAGNNRLA
LSGDATYAGN ARFGAGNDTM ALAGTSKFTG LADFGGGADA LTIGGTSVFT GTLANSSGLA
VSVNGGTFDV RGAATIASLA VTDKGVLGVM LDTGSTGTAL QVTGNASFGA ESKLALQLSS
IEEAEGEHVV LTAGSITGAN NLTASQTLLP FLYKGTLTST ATRLIVDVAR KSTSELGLNR
SEAGAFDAVL DAVVAEQKIE DVFLGITDGD QFRSQLQQML PEHEGGVFET VTSGSRALAR
HLLDPNAPYQ DEGKWGYWVN QAVWGTSKGI GNTASYDVSG WGISLGAEIE SDVGNFGGSI
AFLSGKDSNG SNANEVSTSQ FEGALHWRLR SDGFMANARV SGAPVKLKGT RIFRAEAGAE
DIEETMKGKW DATLWSASGS VAYDTRLGGL TLRPMVAVDY YKLQEDGYQE TGGGDALDLT
VLDRDSDELA VTGTVTLGLE FGGADEYDGW TRFELEGGRR QIVSGTLGAT TASFKDGTPF
TLIPDDRTSG WVGRLRGIAG NSAFQVAGEV SAEEQQSHVG WAFRASLRVG L
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