Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sala_1086 |
Symbol | |
ID | 4081561 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingopyxis alaskensis RB2256 |
Kingdom | Bacteria |
Replicon accession | NC_008048 |
Strand | + |
Start bp | 1115155 |
End bp | 1116360 |
Gene Length | 1206 bp |
Protein Length | 401 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 638009447 |
Product | cystathionine gamma-synthase |
Protein accession | YP_616136 |
Protein GI | 103486575 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0626] Cystathionine beta-lyases/cystathionine gamma-synthases |
TIGRFAM ID | [TIGR01325] O-succinylhomoserine sulfhydrylase |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAAGA CGACGGGTCT CGACCGGAAC AAGACGAAGA CGTGGCATCC CGCGACGCAG GCGGTGCGCG GCGGCACGTG GCGCAGCGAG CATGGCGAGA CGTCGGAGGC GCTCTTCCTG ACCTCGGGCT ATACCTATGA CAGTGCCGAG GAAGTGGCCG CCCGCTTTGC CGGCGAAGCG CAGGGCATGA CCTATTCGCG GCTCCAGAAT CCGACCGTGG CGATGCTGGA GGAACGCATC GCGCTGATGG AGGGGGCCGA GGCGTGCCGC ACGCAGGCGA CGGGCATGGC GGCGATGACC ACCGCGCTGC TCTGCCAATT GTCGGCGGGC GACCATATCG TCGCGGCGAA GGCGGCGTTT GGCTCGTGCC GCTGGTTGAT CGACCATCTC TGTCCGCGCT TCGGGATCGA CACCACCGTC GTCGATGGCC GCGACAATGA GGCGTGGGAA CGGGCCATCC AGACGAATAC TAGGGTCTTT TTCTTTGAAA CCCCGGCCAA TCCGACGATG GATATTGTCG ACATGCGGCA TGTGTGCGCG CTGGCGAAGG CGCATGGAAT CACCAGTGTC GTCGATAATG CCTTTGCGAC GAGCGCGCTC CAGCGCCCGA TGGATTTCGG CGCCGATGTC GTGGCCTATT CGGCGACCAA GCTGATGGAG GGGCAGGGGC GCGTGCTCGC GGGCGCGGTG TGTGGGACCG AAAAGTTCAT CAACGAGGTG CTGCTGCCGT TTCAGCGCAA CACGGGGCCG AACCTGTCGC CCTTCAACGC CTGGGTGGTG ATGAAGGGAC TGGAGACGCT CGACCTGCGC GCGCGGCGCC AGTCGGAAAA CGCGCTGGCC GTCGGCAAGT TTGTCGAAAG CCGGGTGCCG CGCATCCTGC ATCCCGGCCT TGCGAGCCAT CCGCAGCATG ATCTGGCGAA AAGCCAGATG GAGGCTTGCG GACCGATCTT TTCCTTCATT CTCGACGGGC GCGAACAGGC GATGGCATTT CTCAACGCGC TCGAACTGGT CGACATTTCC AACAATATCG GCGATTCGCG CAGCCTTTGT TGTCACCCCG CATCTACCAC CCATTACAGT GTCAGCGCCG AGGCGCGCGC CGATATGGGC GTCGTGGAAG GAATGCTGCG TATCAACATC GGGCTCGAAG ATCCGCGCGA CATCATCGCC GATCTGGACC AGGCATTGAC CAGGGTCGGG CTTTAG
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Protein sequence | MKKTTGLDRN KTKTWHPATQ AVRGGTWRSE HGETSEALFL TSGYTYDSAE EVAARFAGEA QGMTYSRLQN PTVAMLEERI ALMEGAEACR TQATGMAAMT TALLCQLSAG DHIVAAKAAF GSCRWLIDHL CPRFGIDTTV VDGRDNEAWE RAIQTNTRVF FFETPANPTM DIVDMRHVCA LAKAHGITSV VDNAFATSAL QRPMDFGADV VAYSATKLME GQGRVLAGAV CGTEKFINEV LLPFQRNTGP NLSPFNAWVV MKGLETLDLR ARRQSENALA VGKFVESRVP RILHPGLASH PQHDLAKSQM EACGPIFSFI LDGREQAMAF LNALELVDIS NNIGDSRSLC CHPASTTHYS VSAEARADMG VVEGMLRINI GLEDPRDIIA DLDQALTRVG L
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