Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sala_1083 |
Symbol | |
ID | 4081558 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingopyxis alaskensis RB2256 |
Kingdom | Bacteria |
Replicon accession | NC_008048 |
Strand | + |
Start bp | 1112933 |
End bp | 1113331 |
Gene Length | 399 bp |
Protein Length | 132 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 638009444 |
Product | phenylacetic acid degradation-related protein |
Protein accession | YP_616133 |
Protein GI | 103486572 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG2050] Uncharacterized protein, possibly involved in aromatic compounds catabolism |
TIGRFAM ID | [TIGR00369] uncharacterized domain 1 |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTATATGA ACTTCGCCGC CACCATGCCG CTTGCGGGCA CGCTCGGCGT GACGATCGAC GAGGCGAGCA GGGATCGCGT CGCGGGGAAG CTCCCCGTGC GCCCCGAAAT CTGCACCGCG GGCAACATCG TCCATGGCGG CGCGATCATG GCGTTCGCCG ATTGCCTTGG CGCGGTCGGA GCCTTCCTCA CCTTGCCTGA AGGCGCGAGC GGCACGACGA CGATCGAGAG CAAGACGAAT TTCCTCGGCG GCGGGCCTGT CGGTTCGGTG CTGGCGGGGG AAGCGACCCC GGTGAAGATC GGCAAGCGCC TGTCGGTGTG GCAGACGCGC ATTCGTACCG ACGAGGGCGC CGACGTTGCG CTGGTGACGC AGACGCAGCT GGTGCTTTGG CCAGCCTGA
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Protein sequence | MYMNFAATMP LAGTLGVTID EASRDRVAGK LPVRPEICTA GNIVHGGAIM AFADCLGAVG AFLTLPEGAS GTTTIESKTN FLGGGPVGSV LAGEATPVKI GKRLSVWQTR IRTDEGADVA LVTQTQLVLW PA
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