Gene Sala_1083 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_1083 
Symbol 
ID4081558 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp1112933 
End bp1113331 
Gene Length399 bp 
Protein Length132 aa 
Translation table11 
GC content67% 
IMG OID638009444 
Productphenylacetic acid degradation-related protein 
Protein accessionYP_616133 
Protein GI103486572 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG2050] Uncharacterized protein, possibly involved in aromatic compounds catabolism 
TIGRFAM ID[TIGR00369] uncharacterized domain 1 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTATATGA ACTTCGCCGC CACCATGCCG CTTGCGGGCA CGCTCGGCGT GACGATCGAC 
GAGGCGAGCA GGGATCGCGT CGCGGGGAAG CTCCCCGTGC GCCCCGAAAT CTGCACCGCG
GGCAACATCG TCCATGGCGG CGCGATCATG GCGTTCGCCG ATTGCCTTGG CGCGGTCGGA
GCCTTCCTCA CCTTGCCTGA AGGCGCGAGC GGCACGACGA CGATCGAGAG CAAGACGAAT
TTCCTCGGCG GCGGGCCTGT CGGTTCGGTG CTGGCGGGGG AAGCGACCCC GGTGAAGATC
GGCAAGCGCC TGTCGGTGTG GCAGACGCGC ATTCGTACCG ACGAGGGCGC CGACGTTGCG
CTGGTGACGC AGACGCAGCT GGTGCTTTGG CCAGCCTGA
 
Protein sequence
MYMNFAATMP LAGTLGVTID EASRDRVAGK LPVRPEICTA GNIVHGGAIM AFADCLGAVG 
AFLTLPEGAS GTTTIESKTN FLGGGPVGSV LAGEATPVKI GKRLSVWQTR IRTDEGADVA
LVTQTQLVLW PA