Gene Sala_1076 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_1076 
Symbol 
ID4082341 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp1107705 
End bp1108490 
Gene Length786 bp 
Protein Length261 aa 
Translation table11 
GC content60% 
IMG OID638009437 
ProductF0F1 ATP synthase subunit A 
Protein accessionYP_616126 
Protein GI103486565 
COG category[C] Energy production and conversion 
COG ID[COG0356] F0F1-type ATP synthase, subunit a 
TIGRFAM ID[TIGR01131] ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes) 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCGGCGG AATCCGGCAA GATCGACCCG ATGCACCAGT TCGAGGTGAC CCCGCTCGGC 
GGCGGTTTCA ACCTTGGCGG GCAAGAGGTT CTATTCACCA ACAGCGCGCT TTGGATGGTC
GTTGCCGCGA TCACGCTCGG CCTGTTCATG TGGGGCGGGA TGCGCCGCCA GCTCGTCCCG
GGCCGCTGGC AGGTCGCGGT CGAAGGCTTC ACCGGCTTCA TTTCGAGCAT GATGATGGCG
AATATCGGCA CCGAAGGCCG CAAATATACG CCCTATGTCT TTTCGCTCTT CATGTTCATC
CTCTTCTGCA ACCTGCTCGG CATGTTGCCG CTGGGTGTGC TGGGGCTGCA TCCCTTCACC
GTCACCAGCC ATATTGCGAT TACCGGCGTC CTCGCCCTGA TCAGCTTCGC GATCGTCCTT
GTCGTCGGTT TCTGGCGCCA TGGCCTCCAT TTCTTCTCGC TCTTCGTGCC GCACGGCACG
CCGCTGCCGA TGATCCCGAT CATCGCGCCG ATCGAGTTCG TGTCCTTCAT GGTCCGACCG
TTCAGCCTCG GTCTGCGTCT GTTCGTCGCG ATGACGGCGG GCCACGTGTT GCTGAAGGTG
CTTTCGGGCT TTGTCATCAA CGGTTTCAAC GCTGAAACCC TGTGGCTCGG TTCGATCGTG
TCGGTGCTCA GTTTCACGTT GATGATCGGC ATCAGCGCGC TCGAACTGCT GGTCGCCGGC
ATTCAGGCCT ATGTTTTCGC CCTGTTGACC TCGCTTTATA TCAATGACGC GGTCAACCTC
CACTAA
 
Protein sequence
MAAESGKIDP MHQFEVTPLG GGFNLGGQEV LFTNSALWMV VAAITLGLFM WGGMRRQLVP 
GRWQVAVEGF TGFISSMMMA NIGTEGRKYT PYVFSLFMFI LFCNLLGMLP LGVLGLHPFT
VTSHIAITGV LALISFAIVL VVGFWRHGLH FFSLFVPHGT PLPMIPIIAP IEFVSFMVRP
FSLGLRLFVA MTAGHVLLKV LSGFVINGFN AETLWLGSIV SVLSFTLMIG ISALELLVAG
IQAYVFALLT SLYINDAVNL H