| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_1051 |
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| Symbol | |
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| ID | 4080776 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | + |
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| Start bp | 1084987 |
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| End bp | 1086363 |
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| Gene Length | 1377 bp |
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| Protein Length | 458 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 638009411 |
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| Product | DEAD/DEAH box helicase-like protein |
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| Protein accession | YP_616101 |
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| Protein GI | 103486540 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0480198 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAATTTG CCGACCTCGG CCTTTCCGAC GAACTTTTGC GCGCGATCGA CGAGTCGGGC
TATAGCGAAC CGACTGCAAT CCAGGCGGGC GCCATCCCCT CTGTCCTGAT GATGCGCGAC
ATGATCGGCA TTGCACAGAC GGGAACGGGG AAAACCGCCT CCTTTGTGCT GCCGATGATC
GACATATTGG CGCACGGCCG CGCCCGCGCG TTGATGCCGC GTTCGCTGAT CCTCGAGCCG
ACGCGCGAAC TGGCGGCGCA GGTCGCCGAA AACTTCGAAA AATACGGCAA GTATCACAAG
CTGTCGATGG CGCTGCTGAT CGGCGGCGTG CAGATGGGCG ACCAGATCAA GGCGCTCGAA
AAAGGTGTCG ATGTGCTGAT CGCGACGCCG GGGCGGCTGA TGGACCTGTT CGAGCGCGGC
AAGATCTTGC TCACCGGCTG CAACCTGCTG GTGATCGACG AGGCCGACCG GATGCTCGAC
ATGGGGTTCA TTCCCGACAT CGAGAATATC TGCACCAAGC TGCCTGCCAA TCGCCAGACC
CTGCTGTTCT CGGCGACGAT GCCGCCGCCG ATCAAGAAGC TGGCCGACAA GTTCCTGTCG
AACCCCAAGA CGATCGAGGT CGCGCGCCCC GCGAGCCGTA ACGAGAATAT CGAGCAGTTC
GTGGTCAAGA CGTCCGAACG CGGCAAGCGC GATACGCTGC GCGGGCTGAT CGAGGCCGAG
GATCTGTCGA CCGCGATCGT CTTTTGCAAC CGCAAGACCA CCGTGCGCGA GCTGGCGAAA
TCGCTCCAGC GCTCCGGCTA CAGGGCCGGC GAGATCCATG GCGACATGGA CCAGTCGAGC
CGCATCGCCG AACTCGACCG GTTCAAGGCG GGAACGATCA ACATATTGGT GGCGTCGGAC
GTCGCGGCGC GCGGGCTCGA CGTCAAGGGC GTCAGCCATG TGTTCAACTT CGACGCGCCC
TGGCATCCCG ACGATTATGT CCACCGCATC GGCCGCACCG GCCGCGCGGG GGCACAAGGG
CGTGCTTTCA CATTGGTGAC GCCGTCGGAT GACGAGGCGA TCGACAATAT CCAGAAGCTG
ACCGGTTACA ATATCCCCGT CCACGGGACC GCCACGGCCG ACGCCGCCCC GGCGAAGGAC
GAGCCGCGCG AGGAGCGCGA ACCGCGCCGC GAAAGCCGTC CGGCCCGTGG TGGACGCGGT
CGTGCCAAGC CTGCCGACCC GGACGCGAAA CGCGCGGACG ACAAGCGCAA CGAAGCTCCC
AGGAAAAAGG ACGCGGGCCG CAAGCCGCCG CCCGCCGCGC GGCAGGACGA CGATGGCTCC
GACGACGGCT GGAATGGCCC GATGCCGGGT TTCCTGTCGG TTGGGTTCGG GAGCTGA
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| Protein sequence | MKFADLGLSD ELLRAIDESG YSEPTAIQAG AIPSVLMMRD MIGIAQTGTG KTASFVLPMI
DILAHGRARA LMPRSLILEP TRELAAQVAE NFEKYGKYHK LSMALLIGGV QMGDQIKALE
KGVDVLIATP GRLMDLFERG KILLTGCNLL VIDEADRMLD MGFIPDIENI CTKLPANRQT
LLFSATMPPP IKKLADKFLS NPKTIEVARP ASRNENIEQF VVKTSERGKR DTLRGLIEAE
DLSTAIVFCN RKTTVRELAK SLQRSGYRAG EIHGDMDQSS RIAELDRFKA GTINILVASD
VAARGLDVKG VSHVFNFDAP WHPDDYVHRI GRTGRAGAQG RAFTLVTPSD DEAIDNIQKL
TGYNIPVHGT ATADAAPAKD EPREEREPRR ESRPARGGRG RAKPADPDAK RADDKRNEAP
RKKDAGRKPP PAARQDDDGS DDGWNGPMPG FLSVGFGS
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