Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sala_1044 |
Symbol | |
ID | 4080769 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingopyxis alaskensis RB2256 |
Kingdom | Bacteria |
Replicon accession | NC_008048 |
Strand | - |
Start bp | 1076498 |
End bp | 1077640 |
Gene Length | 1143 bp |
Protein Length | 380 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 638009404 |
Product | cell wall hydrolase, SleB |
Protein accession | YP_616094 |
Protein GI | 103486533 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3773] Cell wall hydrolyses involved in spore germination |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGCGCTG CAAGCGATCA GCCGGCGCGG CGGCGGCACG ACTGGACGGG CTGGCTGTTC GTCCTGCTCG CGATGCTTGC GATCGGCGGT GTCCTCCAAG CGAGCGGCGA CAGCGTCCCG CGCTCCCTGC GTCCTCAGCC GGTCGCGCCG CCCGCCGATG TCGTCCCTGA AGCGCCGCCA ATGGTGCTCG CACCGCTTAC CGCGGCGGAC GCGCGCGCCC AGAACGCCGA AATCGACATC ATTACCAGGG GCTTCGCGGC CCCGCCCCCC TTCGTCTACG CCGGGAACGG CGATGCCCGT GCCCGCGCGC GCGACTGCCT CGCCGCCGCG ATGCTTTACG AGGCGGGAGA CAATGCGCGC GGACAGCAGG CGGTGGGCCA GGTTGTGCTT AACCGTGCGC GCCACCCCGC CTTCCCGAAA TCGATCTGCG GCGTGGTGTT CCAGGGTTCC GAACGCGCAA CCGGCTGCCA GTTCACCTTC ACCTGCGACG GCGCACTCGC GCGCCGCTAT TCGGACGCCG CGTGGCAGCG CGCGCGGAGC AATGCAGACC TGATGCTGTC GGGCGGCACC TATCCAGCGG TCGGGCTCGC GACCCATTAT CACACCGACT GGGTGCGCCC CTATTGGAGC GACAGCCTGG AAAAGATCGC GATTGTCGAT ACGCACCTCT TTTTCCGCTG GCCGGGCTAT TGGGGCACGC CGGGCGCCTT TCGCGGCGCG GTGTCAGGCG GCGACGGGCC GGTCGCCAAA CTCGCCGCCA TTTCGCCGCT CCACGCGCTC GCGCTCGGCC TGCGTGCCGA CATGGCGGCC GTCGATGCCA ACGCCGCGGT CGGCGCGGCG CGCATCGTGC CGGGCATGGG TGCGGCGGCG GGCCGCGACA CCATCTATAT CCAGCTCGAC CGCCGCGCCG CGCCCGAAAG CTTCGTCGCC ACCGCGCTGC GCCTCTGTGG CGACCAGCCC TATTGCAAAT TCATGGGCTG GACCAATCCG GTGCTGAAGC CCGACAGCGA TGCGATGACC GACACGCAGC GCGCGGCGAT GAGCTTCTCC TACCTCCGCG ACGACAAGGC GGGATTCGAA AAGGCGCTGT GGAATTGCAG CGAATATAAG CGCGACGACG CGCGCCAGTG CATGAAGCGC TGA
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Protein sequence | MGAASDQPAR RRHDWTGWLF VLLAMLAIGG VLQASGDSVP RSLRPQPVAP PADVVPEAPP MVLAPLTAAD ARAQNAEIDI ITRGFAAPPP FVYAGNGDAR ARARDCLAAA MLYEAGDNAR GQQAVGQVVL NRARHPAFPK SICGVVFQGS ERATGCQFTF TCDGALARRY SDAAWQRARS NADLMLSGGT YPAVGLATHY HTDWVRPYWS DSLEKIAIVD THLFFRWPGY WGTPGAFRGA VSGGDGPVAK LAAISPLHAL ALGLRADMAA VDANAAVGAA RIVPGMGAAA GRDTIYIQLD RRAAPESFVA TALRLCGDQP YCKFMGWTNP VLKPDSDAMT DTQRAAMSFS YLRDDKAGFE KALWNCSEYK RDDARQCMKR
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