Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sala_1021 |
Symbol | |
ID | 4081709 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingopyxis alaskensis RB2256 |
Kingdom | Bacteria |
Replicon accession | NC_008048 |
Strand | - |
Start bp | 1054637 |
End bp | 1055377 |
Gene Length | 741 bp |
Protein Length | 246 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 638009381 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_616071 |
Protein GI | 103486510 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0395] ABC-type sugar transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGTCGG TCAGCTTCAT GGCGCGCGGC GAAGCGGCGC AATTCCCGCC GCCGCTGCTG CCGGGCGATC CGACGCTCGA CAATTACCGC GCCCTGTTCG GCACCTTTGG CGTCGGGCGT TTCCTTCTTA ACAGCCTGCT CGTCTCGACG CTCGCGACGC TGCTCGCGCT GCTTTTCACG ATCCCGGCGG GCTATGCCTT TGCCAAGCTG CGCTTCAAGG GCCGCGATGC GACGTTCCGC CTGCTCGTCG CCGCGCTTGT CGTGCCGGGC CAGATCGGGA TGCTGCCCCT GTTCCTCGAA CTCAAGGCGA TGGGGCTGGT CAACAGCTAT GCCGGCGCGC TGGTGCCCTG GCTTGCGGGG ATTTTCGGCA TCTTTCTCGT CCGCCAATAT AGCCTGTCGA TCCCCGACGA AATGCTCGAA GCGGCGCGCA TCGACGGCGC GAGCGAGGCG CAGATACTGC GCCGCATCGT GCTGCCGATC CTCACCCCGA TCATCGTCAC GCTCGCGCTG TTCGTGTTCC TCGGCAGCTG GAACGATTTC ATGTGGCCGC TGATCGTCCT CGCCGATCAG GATCTTTACA CCCTCCCGGT CGCCCTCGCC GCACTCAGCC GCGAGCATGT GCAGGACAAT GAACTGATGA TGGCGGGCGC CGTCGTCACT ACCCTGCCCG TCCTCATCCT CTTCCTCGCC CTCCAGCGCT TCTACTTGAG CGGCCTTCTC GCGGGGAGCG TCAAGGGATG A
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Protein sequence | MLSVSFMARG EAAQFPPPLL PGDPTLDNYR ALFGTFGVGR FLLNSLLVST LATLLALLFT IPAGYAFAKL RFKGRDATFR LLVAALVVPG QIGMLPLFLE LKAMGLVNSY AGALVPWLAG IFGIFLVRQY SLSIPDEMLE AARIDGASEA QILRRIVLPI LTPIIVTLAL FVFLGSWNDF MWPLIVLADQ DLYTLPVALA ALSREHVQDN ELMMAGAVVT TLPVLILFLA LQRFYLSGLL AGSVKG
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