Gene Sala_0992 details

Gene Information

• Locus tag: Sala_0992
• Symbol: mscL
• ID: 4081680
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Sphingopyxis alaskensis RB2256
• Kingdom: Bacteria
• Replicon accession: NC_008048
• Strand: +
• Start bp: 1017357
• End bp: 1017779
• Gene Length: 423 bp
• Protein Length: 140 aa
• Translation table: 11
• GC content: 63%
• IMG OID: 638009352
• Product: large-conductance mechanosensitive channel
• Protein accession: YP_616042
• Protein GI: 103486481
• COG category: [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG1970] Large-conductance mechanosensitive channel
• TIGRFAM ID: [TIGR00220] large conductance mechanosensitive channel protein

Plasmid Coverage information

• Num covering plasmid clones: 19
• Plasmid unclonability p-value: 0.158656
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 16
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGTTGGGCG AGTTCAGGCA GTTCATCGCC AGGGGCAATG TCATGGACCT GGCGGTCGGC 
GTCATCATCG GCGGCGCCTT TGCGACCATC ACCGGTTCGC TGACCGAAGA TGTCATCATG 
CCGCTGGTCG GCGCGCTCTT TGGCGGGGTC GATTTTTCGA ACCGGTTCAT CCTGCTCGGC 
AGCGTGCCCG ACGGGATGTC GGCGACCGAC TATGCCGCGC TCAAGGAGGC CGGGGTCGCG 
ATGATCGGTT ACGGCGCCTT CGTCACGGCG GTCATCAATT TCCTGATCCT GGCCTTCATC 
ATCTTCCTGC TCGTGCGCTG GGTGAACAAG GTCGTCCGCA AGCCGGAGGC GGACGCCTCG 
CCCGCGGGGC CGAGCGAGGT CGATCTGCTC ACCGAAATCC GCGACGAATT GCGAAGAAAA 
TAA 

 

Protein sequence

MLGEFRQFIA RGNVMDLAVG VIIGGAFATI TGSLTEDVIM PLVGALFGGV DFSNRFILLG 
SVPDGMSATD YAALKEAGVA MIGYGAFVTA VINFLILAFI IFLLVRWVNK VVRKPEADAS 
PAGPSEVDLL TEIRDELRRK