Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sala_0954 |
Symbol | |
ID | 4082453 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingopyxis alaskensis RB2256 |
Kingdom | Bacteria |
Replicon accession | NC_008048 |
Strand | + |
Start bp | 978688 |
End bp | 980271 |
Gene Length | 1584 bp |
Protein Length | 527 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 638009315 |
Product | amino acid/peptide transporter |
Protein accession | YP_616005 |
Protein GI | 103486444 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG3104] Dipeptide/tripeptide permease |
TIGRFAM ID | [TIGR00924] amino acid/peptide transporter (Peptide:H+ symporter), bacterial |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.935259 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCAAAG CCTATGCCCA GCACGGGGAT GCCGCCGGGA CGTTTCTCGG CCACCCCAAG GGGCTTTTCG TCCTTTTTTT CGCCGAAATG TGGGAGCGTT TTTCCTATTA CGGGATGCGC GCGCTGCTGA TTTTCTACCT GACGAAGCAC TGGCTGTTCT CGGACAGTGA ATCGGGGGTC ATCTATGGCG CCTATACCGC GCTCGTCTAC ATCACGCCGG TGCTGGGCGG CTATCTGGCG GACAAATGGC TGGGGCAGCG CAAGGCAGTG CTCTTCGGCG CCATATTGCT GACCTTCGGC CATTTCATCA TGGGCTTCGA GGGTGACGGC GGGCAGGATC CCGCCAGCCT CAACATCTTC TGGCTGGCGC TTGCCTTCAT CATCGTCGGT TCGGGTTTCC TGAAAGCCAA TATCTCGGTG ATCGTCGGCC AGCTCTATCC GCGCACCGAC GTGCGCCGCG ACGGCGCCTA TACGATTTTC TATATGGGGA TCAACCTCGG CGCCTTCCTC GGTTCGCTGC TCTGCGGCTA TCTGGGCGAA ACCTATGGCT GGGCCTATGG CTTCGGCGCC GCGGGCTTCG GGATGCTGCT GGGCCTGATC GTCTTCATCT GGGGCAAGCC GCTGCTGCTC GGCCGCGGCG AAGCGCCCGA TCCCGCCAGG CTCGCCGCGC CGGTGATGGG CATCAAGTTC GAATGGCTGC TCTATATCGT CGGTATCCTT GCCGTCGGCG TCTGCTGGTG GATGGTGCAG AATCAGGCGG TCGTCGGCAC GTTGCTCGGC GTCGCCGGGG CGATCCTCGT CGCCTATGTC ATCTTCACCG CGGTGGTGAA GCTGCCGTCG GACGATCGCG ACCGCATCTT TGCCGCCATG TTCCTGATCC TCGGTTCGAT CCTGTTCTGG GCGTTGTTCG AGCAGGCGGG TTCGTCGCTC AACCTGTTCA CCGATCGCTA TGTCGATCGC GCCGGGGTGC CCGCGTCGGT GTTCCAGTCG CTCAACGCCG GCTATATCGT CCTGCTGGCG CCGCTGTTCG CGATGCTGTG GACGTGGCTC GGTCGCCGCA ACATGGAGCC TTCGGCGCCG GCGAAGTTCG GCCTGGCGAT GCTGCAACTG GGCCTCGGCT TTCTTGTCCT CAAATGGGGC GCCGAAGCGG TCGGCATGGG CAATGCGACG CCGGTGCTGT TCATCTTCCT GATCTATCTG CTCCACACGA CCGGCGAACT TTGCCTGTCG CCCGTGGGGC TCAGTGCGAT GAACCGTCTC GCGCCCGCGC ACATGGCCTC GCTCATCATG GGGACGTGGT TCTTCGCCTC CGCGACCGGC AATTTTGCCG CTGGCCTGAT CGCCGCGGCG ACGGGCTCCG AAAAGGCGAG CGGCGAGGGT GCGGGCAAGG CGCTGGTGCT CGATGTCTAT CAGACGATCG GCCTGTGGGC GATCGGCTTT GGCGTGCTGG TGATCCTCGT GTCGCCGCTG ATCAAGAAGC TGATGCACCT CGATACGCTG CGCGATGCCG ATGAGCTGGC GGGCAGCAAG GAGCTGGCCG AGCCGCAGGC GGCGGGCGTT CATCCCGAAC CCAAGGGGGC GTAA
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Protein sequence | MTKAYAQHGD AAGTFLGHPK GLFVLFFAEM WERFSYYGMR ALLIFYLTKH WLFSDSESGV IYGAYTALVY ITPVLGGYLA DKWLGQRKAV LFGAILLTFG HFIMGFEGDG GQDPASLNIF WLALAFIIVG SGFLKANISV IVGQLYPRTD VRRDGAYTIF YMGINLGAFL GSLLCGYLGE TYGWAYGFGA AGFGMLLGLI VFIWGKPLLL GRGEAPDPAR LAAPVMGIKF EWLLYIVGIL AVGVCWWMVQ NQAVVGTLLG VAGAILVAYV IFTAVVKLPS DDRDRIFAAM FLILGSILFW ALFEQAGSSL NLFTDRYVDR AGVPASVFQS LNAGYIVLLA PLFAMLWTWL GRRNMEPSAP AKFGLAMLQL GLGFLVLKWG AEAVGMGNAT PVLFIFLIYL LHTTGELCLS PVGLSAMNRL APAHMASLIM GTWFFASATG NFAAGLIAAA TGSEKASGEG AGKALVLDVY QTIGLWAIGF GVLVILVSPL IKKLMHLDTL RDADELAGSK ELAEPQAAGV HPEPKGA
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