| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_0938 |
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| Symbol | |
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| ID | 4080491 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | + |
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| Start bp | 956765 |
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| End bp | 957550 |
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| Gene Length | 786 bp |
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| Protein Length | 261 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 638009299 |
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| Product | 3-hydroxybutyrate dehydrogenase |
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| Protein accession | YP_615989 |
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| Protein GI | 103486428 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | [TIGR01963] 3-hydroxybutyrate dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.60557 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACCTTA AAGGCAAGAC TGCGCTCGTC ACCGGATCGA CTTCGGGCAT CGGGCTCGGC
ATCGCCAAGG CCTTTGCCGC CGACGGCGCG AACCTCATCA TCAACGGCTT TGGCGATGCC
GACGCGATCG AGGCCGAACG CAAGGAGCTG GAAGCGATCA GCGGCGGCAA GGCTGCCTAT
GACGGCGCCG ATCTGACCAA GCCTGACGAA ATCATGGCGA TGTTCACGCG CGCGGAGGCG
GATTTCGGCG GGGTCGACAT CCTCGTCAAC AATGCGGGGA TGCAGTTCGT CTCGCCTGTC
GAGGATTTTC CACCCGAAAA GTGGGATATG ATCATTGCGC TCAACCTGAC CGCGGCCTTT
CACACGATCC GTCATGCGGT GCCGGGGATG CGCAGGAAGA AGTGGGGACG GATCATCGGC
ACCGCCTCGG CGCACTCGCT CGTCGCCTCG CCCTTCAAAT CGGCCTATGT CACCGCGAAG
CACGGGCTGG CGGGCCTCAC CAAAACGGTG GCGCTCGAAG TGGCGGACGC CGGAATCACC
GTCAACTGCA TCAGTCCGGG TTATGTCTGG ACACCGCTGG TCGAGAATCA GATTCCCGAC
ACGATGAAGG CGCGCGGCAT GACGCGCGAG CAGGTGATCA ACGATGTGCT GCTCGCGGGG
CAGCCGACGA AGCAGTTCGT CACGGTCGAG CAGGTCGCGG CGCTCGCCGC TTTCCTCACG
CGCGACGAGG CGGCGAACAT CACCGGCGCG AACCTCAGCG TCGATGGCGG CTGGACCGCG
GCCTGA
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| Protein sequence | MHLKGKTALV TGSTSGIGLG IAKAFAADGA NLIINGFGDA DAIEAERKEL EAISGGKAAY
DGADLTKPDE IMAMFTRAEA DFGGVDILVN NAGMQFVSPV EDFPPEKWDM IIALNLTAAF
HTIRHAVPGM RRKKWGRIIG TASAHSLVAS PFKSAYVTAK HGLAGLTKTV ALEVADAGIT
VNCISPGYVW TPLVENQIPD TMKARGMTRE QVINDVLLAG QPTKQFVTVE QVAALAAFLT
RDEAANITGA NLSVDGGWTA A
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