Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sala_0934 |
Symbol | |
ID | 4080487 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingopyxis alaskensis RB2256 |
Kingdom | Bacteria |
Replicon accession | NC_008048 |
Strand | + |
Start bp | 952461 |
End bp | 953051 |
Gene Length | 591 bp |
Protein Length | 196 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 638009295 |
Product | type IV pilus assembly PilZ |
Protein accession | YP_615985 |
Protein GI | 103486424 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.375639 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCCGCC GCGGCGGCCA CCCGGATATT CTGCACCGAA CGCCGCCTTT CGACGGGCTC GCTAACCTTC CTTTAACCAG TCAACTCCCA CAAAAACATA TGCCCATTTA CGGACATTTC CTCCCCTTGG CGCCGAATGG CGACAAACGC CAGGACGTGC GCCGCAAACT GAGCCTGCTT GCCCGTGGCG TGAAGCATGA CGGGACGGGT ATCGCGGTCC AGATCCACAA TATATCGGGA ACGGGACTGC TGTTTGAAAG CGACATCCAG CTGGAACCCT GTGACCGGAT CGAAATCGAG CTACCCCATG CGGGCGGCAT CACGGCGGTC GTCATCTGGG CCAGCGGGCG GCTTTTCGGC TGCCAGTTCG AAGGCCCGGT ATCCCCGGCG ACGCTGAGCG CGGTGGAGTT GAAAAGCGCC GTCGCCCCGC CTCCTGAGGT CCAAGAGTCG GGCGCCGAAC CGGCACTGGA TGAATCCCCC GACGATGCTG CGCCCGAGCC GCTTCAGGAG GTGATCGACC GCAGCCGCGA ACAGATCGCC CGTGCCGCGG GGCTTGGCAT CGACCGGGTC CGCATCATCG TCGAATATTA G
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Protein sequence | MARRGGHPDI LHRTPPFDGL ANLPLTSQLP QKHMPIYGHF LPLAPNGDKR QDVRRKLSLL ARGVKHDGTG IAVQIHNISG TGLLFESDIQ LEPCDRIEIE LPHAGGITAV VIWASGRLFG CQFEGPVSPA TLSAVELKSA VAPPPEVQES GAEPALDESP DDAAPEPLQE VIDRSREQIA RAAGLGIDRV RIIVEY
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