| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_0926 |
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| Symbol | uvrA |
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| ID | 4080479 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | - |
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| Start bp | 939137 |
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| End bp | 942040 |
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| Gene Length | 2904 bp |
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| Protein Length | 967 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 638009287 |
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| Product | excinuclease ABC subunit A |
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| Protein accession | YP_615977 |
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| Protein GI | 103486416 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0178] Excinuclease ATPase subunit |
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| TIGRFAM ID | [TIGR00630] excinuclease ABC, A subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.160818 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTCTCA CCCACATTTC CGTGCGCGGT GCGCGCGAGC ATAATCTGAA AGGCGTCGAC
GTCGATCTTC CGCGCGATGC GCTGATCGTC ATCACCGGGC TTTCGGGGTC GGGGAAATCG
TCGCTCGCCT TCGACACCAT CTATGCCGAG GGGCAGCGGC GCTATGTCGA GTCGCTGTCG
GCCTATGCGC GCCAGTTCCT CGAAATGATG CAGAAGCCCG ACGTCGAGCA TATCGACGGC
CTCTCCCCCG CGATCAGCAT CGAGCAGAAA ACGACAAGCC GCAATCCGCG TTCCACCGTC
GCCACCGTCA CCGAAATCTA TGACTATATG CGCCTGCTCT GGGCGCGCGT CGGCATTCCT
TATTCGCCCG CGACGGGCGA GCCGATCAGC GCGCAGACGG TGAGCCAGAT GGTCGATCGG
GTGATGAGCT TGCCCGAAGG AACGCGCGCC TACCTCCTCG CCCCCGTCGT GCGTGGCCGC
AAGGGCGAGT ACAGGAAGGA ACTCGCGCAA TGGCAGAAAG AGGGCTTCAC GCGCGTCCGG
GTCGATGGCG AGTTTTACGA GATCGAGGAC GCCCCGGCGC TCGACAAGAA ATACAAGCAT
GACATCGAGG TCGTCGTCGA TCGCATCGTC GTGCGCGACG GCATCGAGAC TCGGCTCGCG
GACAGTTTCG AAACCGCACT CAAGCTGGCC GATGGACTGG CCTATGTCGA TCTCGCCGAC
GGCGTCGTGC CCGGCCGCGA GGAGGAGGAC GGCGGCGCCG CGGAGCAGAA AATGAAGGGT
GCGGGCATCC CGGCAAACCG CCTCATCTTC TCCGAAAAAT TCGCCTGTCC GGTCAGCGGT
TTCACAATTG CCGAGATCGA ACCGCGGCTG TTCAGCTTCA ACGCGCCGCA GGGCGCCTGC
CCCGCATGCG ACGGCCTTGG CGAGCGGCTC GAGTTCGATC CCGAGCTTGT CGTCCCGAAC
CATGCGCTCA GCCTCAGGAA AGGCGCGGTG GTGCCGTGGG CGAAATCGAA CCCGCCTTCG
CCCTATTATA TGCAGGTGCT CGAAAGCCTC GGCAAAGCCT ATGGCTTCTC GCTCGATACC
CCGTGGCAGG ACCTGCCCGG CGAGGTGCAG CTGATCATCC TCTATGGCAC TGGCGGCAAG
CCCGTCGAGT TGACCTTCAG GGATGGCAAA CGCAGTTACA CGACGCACAA GGCGTTCGAG
GGCGTGATCG GCAACCTCAA TCGCCGGATG CTCCAGACCG AAAGCGCGTG GATGCGCGAG
GAGCTGGGCA AATATCAGAC CGCGCAGCCG TGCGAGACCT GCCACGGCGC GCGGCTGCGC
CCCGAACCGC TGGCGGTGAA GATCGCGGGC GAGAATATCA GCATGTCGGC GCAGCGGTCG
GTCGCCGACG CGCTCCAATG GTTCTCGACG CTTGAGGAGA AGCTGAACGA GCAACAGCGC
CAGATTGCCA AGGCGATCCT GAAGGAAATC AACGAGCGGC TTGGTTTCCT GAACAATGTC
GGGCTCGATT ACCTCAACCT CAACCGCACG TCGGGCACGC TGTCGGGCGG CGAAAGCCAG
CGCATCCGCC TCGCAAGCCA GATCGGCAGC GGCCTGTCGG GCGTGCTCTA TGTCCTCGAC
GAGCCGAGCA TCGGCCTGCA CCAGCGCGAC AACGACCGGT TGCTCGCGAC GCTGAAGCGC
CTTCGCGACC TCGGCAACAC CGTCATCGTC GTCGAGCATG ACGAAGATGC GATCCGCCAC
GCCGACTATG TCGTCGACAT GGGCCCCGGC GCGGGCGTTC ACGGCGGTGA AATCGTCGCA
CAAGGCACGC TGGATGACCT GCTCAAGAAC AGGAAGAGCC TGACCGCGGC CTATCTGACC
GGCGCGAAGA AGATCGAGGT GCCGAAGCAT CGCCGCCCCG GCAATGGCTT CGACCTCGTG
CTCAAGGGCG CGCGCGCAAA CAATTTGCAG AATGTCACCG CCAGGATCCC GCTCGGCACC
TTCACCTGCG TCACCGGCCT GTCGGGGTCG GGCAAGTCGA GCCTGATTAT CGACACCCTC
TATGCCAGCG CGGCGCGCGT GCTCAACGGC GCGCGGATGG TTGCGGGACC GCACGATTCG
CTGAGCGGGC TTGAACATTG CGACAAGGTG ATCGACATCG ACCAGTCACC GATCGGCCGC
ACCCCGCGCA GCAACCCCGC GACCTATACC GGCGCCTTCA CGGTGATCCG CGACTGGTTC
GCAGGACTGC CCGAAGCGCA GGCGCGCGGG TACAAGCCGG GGCGCTTCAG CTTCAATGTC
AAGGGTGGGC GCTGTGAGAC CTGCACCGGC GACGGGCTCA TCAAGATCGA GATGCACTTC
CTGCCCGACG TCTATGTGAC ATGCGAGACA TGCCACGGCA AACGCTACAA CCGCGAAACG
CTGGAGGTGA AGTTCAAGGG GATGAGCATC GCCGACGTAC TCGACATGAC CGTCGAGGAT
GCAGCGGAGT TTTTCAAGGC GGTGCCCGCG ATCCGCGACA AGATGGCGAT GCTGGTGCGC
GTCGGCCTCG GCTATATCAA GGTCGGGCAG CAGGCGACGA CACTGTCGGG CGGCGAGGCG
CAGCGGGTGA AGCTGGCCAA GGAACTGTCC CGCCGCTCGA CCGGACAGAC GCTCTATATC
CTCGACGAAC CGACGACGGG GCTGCATTTC GAGGATGTGC GCAAGCTGCT CGAAGTGCTC
CAGGCGCTGG TCGATCAGGG CAACAGCGTT GTGGTGATCG AGCACAACCT CGATGTCATC
AAGACCGCCG ACTATATCCT CGATCTCGGT CCCGAAGGCG GGGTCAAGGG CGGCGAAATC
GTCGCCGCGG GGACACCCGA ACAGGTAGTG AAGGAAAAGC GCAGCTTCAC CGGGCAGTAT
CTGGCGCCGA TGTTGGAAAA ATAG
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| Protein sequence | MSLTHISVRG AREHNLKGVD VDLPRDALIV ITGLSGSGKS SLAFDTIYAE GQRRYVESLS
AYARQFLEMM QKPDVEHIDG LSPAISIEQK TTSRNPRSTV ATVTEIYDYM RLLWARVGIP
YSPATGEPIS AQTVSQMVDR VMSLPEGTRA YLLAPVVRGR KGEYRKELAQ WQKEGFTRVR
VDGEFYEIED APALDKKYKH DIEVVVDRIV VRDGIETRLA DSFETALKLA DGLAYVDLAD
GVVPGREEED GGAAEQKMKG AGIPANRLIF SEKFACPVSG FTIAEIEPRL FSFNAPQGAC
PACDGLGERL EFDPELVVPN HALSLRKGAV VPWAKSNPPS PYYMQVLESL GKAYGFSLDT
PWQDLPGEVQ LIILYGTGGK PVELTFRDGK RSYTTHKAFE GVIGNLNRRM LQTESAWMRE
ELGKYQTAQP CETCHGARLR PEPLAVKIAG ENISMSAQRS VADALQWFST LEEKLNEQQR
QIAKAILKEI NERLGFLNNV GLDYLNLNRT SGTLSGGESQ RIRLASQIGS GLSGVLYVLD
EPSIGLHQRD NDRLLATLKR LRDLGNTVIV VEHDEDAIRH ADYVVDMGPG AGVHGGEIVA
QGTLDDLLKN RKSLTAAYLT GAKKIEVPKH RRPGNGFDLV LKGARANNLQ NVTARIPLGT
FTCVTGLSGS GKSSLIIDTL YASAARVLNG ARMVAGPHDS LSGLEHCDKV IDIDQSPIGR
TPRSNPATYT GAFTVIRDWF AGLPEAQARG YKPGRFSFNV KGGRCETCTG DGLIKIEMHF
LPDVYVTCET CHGKRYNRET LEVKFKGMSI ADVLDMTVED AAEFFKAVPA IRDKMAMLVR
VGLGYIKVGQ QATTLSGGEA QRVKLAKELS RRSTGQTLYI LDEPTTGLHF EDVRKLLEVL
QALVDQGNSV VVIEHNLDVI KTADYILDLG PEGGVKGGEI VAAGTPEQVV KEKRSFTGQY
LAPMLEK
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