Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sala_0860 |
Symbol | |
ID | 4079996 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingopyxis alaskensis RB2256 |
Kingdom | Bacteria |
Replicon accession | NC_008048 |
Strand | - |
Start bp | 867910 |
End bp | 869205 |
Gene Length | 1296 bp |
Protein Length | 431 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 638009221 |
Product | acyl-CoA dehydrogenase-like protein |
Protein accession | YP_615911 |
Protein GI | 103486350 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1960] Acyl-CoA dehydrogenases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.0816126 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCAACT TTCGCATCGA ACCGGACTTG CAGGCGAGGC TGGACTGGAT GGCAGCGTTT GTCCGCCGCG AATGCGAGCC GATGGACATG CTGTTCCCCG GTCACGGCGC TCCCTATGAC GTAACCGACC GCAAGGCGCG CGCGCATCTG AAACCATTGC AAAAGGAGGT GAAGGCGCAG GGATTGTGGG CCTGTCATCT GGGCGCCGAG CTGGGCGGAC CCGGATATGG TCAACTGACG CTGGCGCTGA TGAACGAACT TCTGGGCCGC AGCTATTGGG CGCCCACCAT ATTCGGCACC GCCGCGCCCG ATACGGGGAA CAGCGAAATC CTGGCGATGT TCGGCACCGA CGAGCAGAAG GCCCGCTACC TGAAGCCGCT GATCGACGGT GAAATCGTAT CGACCTTTTC GATGACCGAA CCGCAGGCCG GGGCCGATCC CAAGGAGTTC ACCTGCCGCG CGTGGCGCGA GGGCGACGAG TGGGTGATCG AGGGAGAGAA ATGGTTCTCC TCCAATGCGC GCTTCGCCGC CTTTCTCATC GTGATGGTCG TGACCAATCC CGAAAACCCG CCGCACGGGC GAATGTCGAT GCTGATCGTG CCCGCCGATG CGCCCGGACT GGAATTCATC CGCCATTCCC AGACGATGGG GGATCGCCGG GGCGACGACG ACGGCATTCA CGCCTATATC CGTTATAATC GCGTGCGGGT TCCACTGGAC GCGATGCTGG GCAACCCCGG CGAGGGGTTC AAGGTCGCGC AGGCGCGGCT GGGCGGCGGC CGTGTCCACC ACGCCATGCG AACGGTCGGC AAATGCCAGC GCGCGATCGA CATGATGCTG GAACGCGCGG TCTCACGCCA CACCCAGGGC AAGCAGCTTG GCGAACATCA GTTCGTGCAG GGAGCGATCG CCGATTCGAT CATCGAGCTG GAACAGTTCC GCCTGCTGGT GCTCAAGACC GCGTGGATCA TCGATGAGGT GGAAAGCGGT CGCGAGCCCC ACGGCGCCGC GCGCACGCAT ATCGCGATGT GCAAGGTGCA GATGGCAAAA GTCTGTCACG ACATCGTCCA GCGCGCGATC CAGATGCACG GAAGCCTGGG CATGACGCTC GAAACGCCGC TCGCCGATAT GTGGATGGGC CTTCCCGCCC TCGCCCTGGC CGACGGACCA ACCGAGGTGC ACAAGGTACA GGTCGCCAAA GCTCATCTGA AGAATGCAAC GCGCGCATCG GGCCTGTTTC CCAGCGAACA TATACCGACG CGGCTGGCAG CGATCCGGGA AAGGAACACG GCATGA
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Protein sequence | MINFRIEPDL QARLDWMAAF VRRECEPMDM LFPGHGAPYD VTDRKARAHL KPLQKEVKAQ GLWACHLGAE LGGPGYGQLT LALMNELLGR SYWAPTIFGT AAPDTGNSEI LAMFGTDEQK ARYLKPLIDG EIVSTFSMTE PQAGADPKEF TCRAWREGDE WVIEGEKWFS SNARFAAFLI VMVVTNPENP PHGRMSMLIV PADAPGLEFI RHSQTMGDRR GDDDGIHAYI RYNRVRVPLD AMLGNPGEGF KVAQARLGGG RVHHAMRTVG KCQRAIDMML ERAVSRHTQG KQLGEHQFVQ GAIADSIIEL EQFRLLVLKT AWIIDEVESG REPHGAARTH IAMCKVQMAK VCHDIVQRAI QMHGSLGMTL ETPLADMWMG LPALALADGP TEVHKVQVAK AHLKNATRAS GLFPSEHIPT RLAAIRERNT A
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