Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sala_0842 |
Symbol | gatB |
ID | 4080050 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingopyxis alaskensis RB2256 |
Kingdom | Bacteria |
Replicon accession | NC_008048 |
Strand | + |
Start bp | 848780 |
End bp | 850255 |
Gene Length | 1476 bp |
Protein Length | 491 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 638009201 |
Product | aspartyl/glutamyl-tRNA amidotransferase subunit B |
Protein accession | YP_615893 |
Protein GI | 103486332 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0064] Asp-tRNAAsn/Glu-tRNAGln amidotransferase B subunit (PET112 homolog) |
TIGRFAM ID | [TIGR00133] glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, B subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.261739 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.0872982 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGGATGA TGAGTGATTA TCGAGTGCAG GGCGAAACCG GCGAGTGGGA GGTCGTGATT GGCCTCGAGG TCCACGCCCA GATCACGACC AACGCCAAGC TGTTTTCGGG CGCCGCGACG GCGTTTGGCG CCGAGCCGAA CACGCAGGTG TCGCTGGTCG ACGCTGCGAT GCCGGGGATG CTGCCGGTGC CGAACCGCGA GTGCATCCGC CAGGCGGTGC GCACGGGGAT GGCGATCGAG GCGCAGATCA ATCGCTGGTC GCGGTTCGAC CGCAAGAATT ATTTCTATGC CGACCTGCCG CAGGGCTATC AGATTTCGCA GCTTTATCAT CCGCTGGTCG GCGAAGGTTC GCTGACGATC GCCGCCGATG AAAAGGCCGG GATTCCCGCC GACAAGGTGA TCGGGATCGA GCGTATCCAT GTCGAACAGG ATGCGGGGAA GCTGATGCAC GACCAGCATC CGACGATGTC CTATGTCGAT TTGAACCGCA GCGGGGTCGC GTTGATGGAG ATCGTGTCGA AACCCGACAT GCGCTCGCCC GCCGAAGCCG GCGCCTATGT GCGCAAGCTG CGCTCGATCC TGCGCTATGT CGGCTCGTGC GACGGCAATA TGGAAGAAGG CTCGATGCGC GCCGACGTCA ACGTCAGCGT GCGGCGGCCC GGCGAGGCGT TCGGCACGCG CACCGAGACG AAGAACGTCA ATTCGGTGCG CTTCGTGATG GCGGTGATCG AGGGCGAGGC GAAGCGGCAG GTCGCGCTGA TCGAGAGCGG CGGCGAGGTG GTGCAGGAAA CGCGCCTCTA CGATCCCGAC CGGGGCGAGA CGCGGTCGAT GCGGTCGAAG GAAGACGCGC ATGACTATCG CTACTTCCCC GATCCCGACC TGTTGCCGCT CGAACTCGAC GACGCCTTTC TCGAAGAATG CCGCGCGAGC CTGCCTGAAT TGCCCGACGC CAAGCGCGCG CGTTATCTGG CGGCGGGGAT CAGCGCCTAT AACGCCGATG TGCTGACCGC CGAGGTCGAG GCGGCGCGCT GGTTCGACGC GCTGCTCGAA GCCGGCGCAA AGCCCGTCGC GGCGGCGAAC TGGGTGACGA GCGAGCTGTT CGGCGCCTTG AACCGGCTCG GTCGCGACAT TTCGGATTCG CCAGTCAGTC CGGCGCAGGC CGCCGAATTG CTCGGCCTCG TCGCCGATGG CACGATTTCG GGGACGATTG CGAAACAGGT ATTCGAAAAG ATGCTCGAAA GCGGCGACGG CGCCGCGGCG ATCGTCGATC GTGAGGGCCT CAAGCAGACG AGCGACACGG GCGCAATCGA AGCCGAGATC GCCAAGGTTC TCGCCGCCAA TGCCGACAAG GTCGAGCAGT ATAAGGGCGG CAAGGAAGCC CTGTTCGGCT TCTTCGTCGG GCAGACGATG AAGGCGATGC AGGGCAAGGC AAACCCGCAG GTCGTCAACG AGCTGCTGAA AAAGGCACTG GGCTGA
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Protein sequence | MRMMSDYRVQ GETGEWEVVI GLEVHAQITT NAKLFSGAAT AFGAEPNTQV SLVDAAMPGM LPVPNRECIR QAVRTGMAIE AQINRWSRFD RKNYFYADLP QGYQISQLYH PLVGEGSLTI AADEKAGIPA DKVIGIERIH VEQDAGKLMH DQHPTMSYVD LNRSGVALME IVSKPDMRSP AEAGAYVRKL RSILRYVGSC DGNMEEGSMR ADVNVSVRRP GEAFGTRTET KNVNSVRFVM AVIEGEAKRQ VALIESGGEV VQETRLYDPD RGETRSMRSK EDAHDYRYFP DPDLLPLELD DAFLEECRAS LPELPDAKRA RYLAAGISAY NADVLTAEVE AARWFDALLE AGAKPVAAAN WVTSELFGAL NRLGRDISDS PVSPAQAAEL LGLVADGTIS GTIAKQVFEK MLESGDGAAA IVDREGLKQT SDTGAIEAEI AKVLAANADK VEQYKGGKEA LFGFFVGQTM KAMQGKANPQ VVNELLKKAL G
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