| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_0816 |
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| Symbol | |
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| ID | 4080462 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | + |
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| Start bp | 820239 |
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| End bp | 821849 |
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| Gene Length | 1611 bp |
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| Protein Length | 536 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 638009176 |
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| Product | major facilitator transporter |
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| Protein accession | YP_615868 |
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| Protein GI | 103486307 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2271] Sugar phosphate permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.973467 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.000368786 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGGCCGATG TCGCGAGCGA GAACAGCATG TCCGGTGCAT CGGCGCCCGC CGAACTCAAG
GCCAGCGGAT ATAGCTGGTA TGTGCTGTCG GTGCTCGTTG TCGTCTATAT CCTGAACTTC
ATCGACCGGC AGATCATCAG CATCCTGGCG GTGGACATCA AGGCCGACCT TCAGCTCAGC
GATTCGGACA TGGGTTTTCT CGGCGGCGCC GCCTTTGCGG TCTTCTACGC GCTGTTCGGC
ATCCCGCTCG GCCGTCTCGC CGACAATTGG AGCCGCGTGA AGCTGCTGTC GATCGGCCTG
ACCCTGTGGT CGGCGATGAC CGCTTTTTCG GGCTTCGCCC ATGACCGGCT GACGCTGACG
CTGGCGCGCA TGGGGGTCGG CGTCGGCGAA GCGACCGCGA GCCCCACCGC CTATTCGCTG
ATCTCCGACT ATTTCCCGAA ACGACAAAAG GCGACCGCAC TCGCCATCTA TTCGTCGGGG
CTCTATCTCG GCGGCGGCGT GTCGCTGTTC ATCGGCGCGG TGATCGTCGA AAGCTGGAAC
CGCGCCTTTC CGGCGGGCGG ACCGCTGGGA CTCGTCGGCT GGCAGGCGGC GTTCCTCGCG
GTCGGCATCC CCGGCCTGCT GCTCGCGCTG TGGGTCGCCA GCCTGCGCGA ACCGGTGCGC
GGCGCGATGG ACGGGGTACC GACGCAAAGC TCGCCCACGC CCTTCCGCGC GTTCGGAAGG
GATTTGTCGA TGATCGTGCC GCCGCTCACC CTCTATGGCG CGTGGCAGCG CGGGCCCGCG
GCGCTCGCGA TCAACATCGG CGTCGCCGCC GCGCTCGCCG CCTTTGCCTG GTGGATGATC
GAACTCACCG GAAATCTGCC GCAATGGTCG GCGGTCGCGC TCGGCTATTA TGCCGTCTTT
TCGTGGGCGA GCACGCTGCG CGCCAATGAT CCCGCGACCT TCCGCCTGAT CTGGGGCACG
CCCGCCTTCA TCTGCACGAC GCTCGGCTAT GGGCTCGTCG CGCTCGCCGC CTATGCGCTT
GCCTTCTGGT CGGCGCCCTA TGCCGAAGTC GTGCTGGGCC TGCCCAAGCA GCAGCTTGCC
TCGATTCTCG GCGCCAATGG CGCGCTCAGC GGCTTCATCG GCGTCATCAT CGGCGGGCGC
GTCGCCGACG CGCTGCGCGC GCGCCACCCC GCGGGACGGA TCTGGATGAT CCTGTTCGGC
GTCGTCGCGC CGGTCATCCC CATCTGGATC GGCTACACAA CTGAAATTGC CGCGCTTTTC
TATACGATGA ACTTCCTCGC CGGGCTGTTC GGCGCCGCGG CGCTCGGCGC GGCCGCCGCG
ACCACGCAGG ATCTGGTGCT GCCGCAGATG CGCGGCACCG CGACCGCCGC CTTTTTCCTC
GGCACGACGC TGATCGGCCT GTCCTTCGGC CCCTATATGG TCGGACAGAT TTCGGATCTG
ACGGGCACGG TGGTGAACGG CCAGCCCGTT GGCAATCTGC GCACCGGCAT CCTGTCGCTG
ATCGGCGTCG CGCCGGTCGC GGTCGCGCTG CTGTTCTATG CCTATCGCGC GCTGCCGGAG
GCCGAGGCGA CGCTCGTGCA GCGTGCGGCC GCGGCGCGCG GCGGCGCCTG A
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| Protein sequence | MADVASENSM SGASAPAELK ASGYSWYVLS VLVVVYILNF IDRQIISILA VDIKADLQLS
DSDMGFLGGA AFAVFYALFG IPLGRLADNW SRVKLLSIGL TLWSAMTAFS GFAHDRLTLT
LARMGVGVGE ATASPTAYSL ISDYFPKRQK ATALAIYSSG LYLGGGVSLF IGAVIVESWN
RAFPAGGPLG LVGWQAAFLA VGIPGLLLAL WVASLREPVR GAMDGVPTQS SPTPFRAFGR
DLSMIVPPLT LYGAWQRGPA ALAINIGVAA ALAAFAWWMI ELTGNLPQWS AVALGYYAVF
SWASTLRAND PATFRLIWGT PAFICTTLGY GLVALAAYAL AFWSAPYAEV VLGLPKQQLA
SILGANGALS GFIGVIIGGR VADALRARHP AGRIWMILFG VVAPVIPIWI GYTTEIAALF
YTMNFLAGLF GAAALGAAAA TTQDLVLPQM RGTATAAFFL GTTLIGLSFG PYMVGQISDL
TGTVVNGQPV GNLRTGILSL IGVAPVAVAL LFYAYRALPE AEATLVQRAA AARGGA
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